Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  166 bits (421), Expect = 5e-46
 Identities = 98/266 (36%), Positives = 141/266 (53%), Gaps = 5/266 (1%)

Query: 2   LKSQQVASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRL 61
           L  Q    LH F   A++ SF+  A  LH+T GA+SQQ+ QLE +LGF LF R +RGV L
Sbjct: 5   LHGQTYVWLHVFSCAARHLSFTRCAEELHITPGAVSQQIRQLEERLGFRLFHRRARGVEL 64

Query: 62  TEAGRILLTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPE 121
           +  G+ L  TV  +Y  I+  +  L        +RL+  PSF  KWL PRL    +R P+
Sbjct: 65  SAEGQRLAATVGEAYGSIDAELQRLDAGMISGTLRLRSIPSFLGKWLTPRLPRLQQRFPD 124

Query: 122 IQIQTFAEGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQE 181
           IQ++  AE + +     D+DLAID     YP   +  L++E + PV + + L     L  
Sbjct: 125 IQLRMVAEDSSIALHEGDFDLAIDLNDGSYPGLLSTALLDEQIFPVCAPSLLRGRPPLH- 183

Query: 182 DWANSEAWQQVVLLHDAMPWANAARDQEWHYWAHQMGITLPE-RRDHYFNRTDMAMSAAE 240
                       LLHD   W  +    EW ++ + +G    + RR H FNR  + + AA 
Sbjct: 184 ---GPADLVHFPLLHDITAWRGSYEYAEWEFYLNAIGYHHADVRRGHTFNRNHLTIEAAI 240

Query: 241 AGVGIAMARTALLSNELDTGRLVTPF 266
           AG+G+A+AR  LL++EL+ G L+ PF
Sbjct: 241 AGMGVAIARRTLLNDELERGTLIVPF 266