Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  129 bits (323), Expect = 1e-34
 Identities = 101/307 (32%), Positives = 145/307 (47%), Gaps = 20/307 (6%)

Query: 2   LKSQQVASLH--TFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGV 59
           L+S+ +++ H   F  VA++ +F  AA  + LT  A+S+Q+  LE ++G +LF RH+R V
Sbjct: 8   LRSRPISAGHLRAFEAVARHLNFRAAAEEMALTQSAVSRQIQSLEEEVGVALFLRHTRAV 67

Query: 60  RLTEAGRILLTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRH 119
            LT AG  LL  VQ+S   I+  +  +  S  RK + L    SFA  WL+PRLE F R +
Sbjct: 68  ELTSAGAQLLLAVQQSLPRIDTAVRQIRQSAGRKSVSLTTFASFASMWLIPRLEAFQRDN 127

Query: 120 PEIQIQTFAEGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWL 179
           PEI I+  A    VD E  D D+A+ YG        A  L  E L PV       A  WL
Sbjct: 128 PEIDIRIDASDVAVDLEVADVDIALRYGPREVMPAGAVRLFGETLTPV-------ASPWL 180

Query: 180 QEDWANSEAWQQVVLLHDAMPWANAARDQ-EWHYWAHQMGITLPER----RDHYFNRTDM 234
            +     +    +      +   +A R   EW  W     +   ER    R  YFN    
Sbjct: 181 LKSSPPIKTPADITRF-TLIEAGDAHRTHLEWLTWRRWFEVNGQERAQPKRWLYFNYAYQ 239

Query: 235 AMSAAEAGVGIAMARTALLSNELDTGRL--VTPFAPIRAKAGYFLIT---HQATDATQVF 289
            + AA  G G+ +AR++L++  L  G L  V P   + +   Y+LI    +      + F
Sbjct: 240 MVQAALTGQGVTLARSSLIAESLANGDLVEVLPQHRMDSPMAYWLIAGPRNALRPEIKAF 299

Query: 290 CQWLQKQ 296
             WLQ Q
Sbjct: 300 WDWLQVQ 306