Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., LysR substrate-binding domain-containing protein from Variovorax sp. OAS795

 Score =  126 bits (316), Expect = 7e-34
 Identities = 88/290 (30%), Positives = 138/290 (47%), Gaps = 18/290 (6%)

Query: 10  LHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRLTEAGRILL 69
           L  F  V +    + AA  LH+T GA+SQQ+ QLE  LG  LF++  R + LT  G+ L 
Sbjct: 11  LRVFDAVCRAKGITRAAQVLHVTPGAVSQQVKQLELGLGAQLFQKSGREIELTAVGKRLA 70

Query: 70  TTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPEIQIQTFAE 129
             V  ++  +   ++ +V     K +RLK TPS A +WLVPRL  FY +HP+I ++    
Sbjct: 71  HRVSDAFDRLNDALNDVVDIPPDKRLRLKATPSLAIRWLVPRLRGFYAQHPDIDLEISTI 130

Query: 130 GALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQEDWANSEAW 189
               D      D AI +G   +   +   L ++  LPV + N LA H     D       
Sbjct: 131 AVADDIRLEGADCAIRHGMGEWADVELDHLFDDEFLPVCAPN-LARHLKTPHDLL----- 184

Query: 190 QQVVLLHDAMPWANAARDQEWHYWAHQMG-ITLPERRDHYFNRTDMAMSAAEAGVGIAMA 248
            Q  LLH  M      R + W  W      +  P           +   AA  G+G+A+A
Sbjct: 185 -QANLLHSMM------RPEAWSLWFSSTELVECPRLHGITLANAALCYQAAADGLGVAIA 237

Query: 249 RTALLSNELDTGRLVTPFAPI-RAKAGYFLITH--QATDA-TQVFCQWLQ 294
           + A + +++ +GRLV     + R ++GY+L+    +A +A  ++F  W++
Sbjct: 238 QRAYVDDDIRSGRLVVAVDHVARTESGYYLVCDPLKAAEAPVRLFRDWIR 287