Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  130 bits (327), Expect = 4e-35
 Identities = 89/297 (29%), Positives = 150/297 (50%), Gaps = 24/297 (8%)

Query: 9   SLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRLTEAGRIL 68
           SL  F   A++ SF+ AA  L +T  A+S Q+  LE  LG  LF R +R + LTE G+  
Sbjct: 10  SLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLLTEEGQSY 69

Query: 69  LTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPEIQIQTFA 128
              ++  +  + +    L+  +E+  + + L PSFA +WLVPRL DF ++ P+I ++  A
Sbjct: 70  FLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPDIDVRIKA 129

Query: 129 ----EGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQEDWA 184
               EG+L D    D D+AI YG   +P   A  L +E+L+P+ S   L  +  +++   
Sbjct: 130 VDMDEGSLTD----DVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPMEK--L 183

Query: 185 NSEAWQQVVLLHDAMPWANAARDQEWHYWAHQMGI-TLPERRDHYFNRTDMAMSAAEAGV 243
           +  A+    LLHD          ++W  +A + G+  +       F+ + M + AA  G 
Sbjct: 184 SDLAYH--TLLHD-------TSRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQ 234

Query: 244 GIAMARTALLSNELDTGRLVTPFAPI-RAKAGYFLITHQ-ATDATQV--FCQWLQKQ 296
           G+A+    L   E+D GRL+ PF  +      ++++ H+   D  ++  F  W+ K+
Sbjct: 235 GVALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKK 291