Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  171 bits (432), Expect = 3e-47
 Identities = 101/266 (37%), Positives = 142/266 (53%), Gaps = 5/266 (1%)

Query: 2   LKSQQVASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRL 61
           L  Q    LH F   A++ SF+  A  LH+T GA+SQQM QLE +LG+ LF R +RGV L
Sbjct: 5   LNGQMFVWLHVFACAARHLSFTRCAEELHITPGAVSQQMRQLEERLGYRLFLRRARGVEL 64

Query: 62  TEAGRILLTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPE 121
           +  G+ L  TV  +Y  IE  +  L     R  +R++  PSF  KWL PRL  F +R+P+
Sbjct: 65  SAEGQRLAQTVAEAYGSIEAELLRLDAGEIRGTLRVRSIPSFLAKWLTPRLPRFQQRYPD 124

Query: 122 IQIQTFAEGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQE 181
           I+++  AE +       D+DLAID     YP   +  L++E + PV S   L     L  
Sbjct: 125 IELRLVAEDSAQALTPGDFDLAIDLNDGSYPGMLSTPLLDEQIFPVCSPALLRGRPPLH- 183

Query: 182 DWANSEAWQQVVLLHDAMPWANAARDQEWHYWAHQMGIT-LPERRDHYFNRTDMAMSAAE 240
                       LLHD   W  ++   EW ++   +G   L  RR H FNR  + + AA 
Sbjct: 184 ---GPADLAHYPLLHDITAWRGSSEYAEWEFYLEGIGAAGLDVRRGHTFNRNHLTIEAAI 240

Query: 241 AGVGIAMARTALLSNELDTGRLVTPF 266
           AG+G+A+AR  LL++EL+ G L+ PF
Sbjct: 241 AGIGVAIARRTLLNDELERGALIVPF 266