Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., putative transcriptional regulator from Pseudomonas putida KT2440

 Score =  132 bits (331), Expect = 1e-35
 Identities = 87/284 (30%), Positives = 145/284 (51%), Gaps = 20/284 (7%)

Query: 1   MLKSQQVASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVR 60
           M +   + +LHTF+  AQ+ +F+ A   LH+T GA+S+Q+  LE  LG++LF+R +RG+ 
Sbjct: 1   MKRLPPLPALHTFLVTAQHCNFTRAGQQLHITQGAVSRQIAALEEHLGYALFKREARGLS 60

Query: 61  LTEAGRILLTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHP 120
           LT  G   L  VQ+ +  IEQ +  +   +   +++    P+   +WL+PRL ++    P
Sbjct: 61  LTREGLDWLPRVQQVFALIEQGVREVGEHSTTLQLK---APTCVMRWLLPRLMEWQALRP 117

Query: 121 EIQIQ---TFAEGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHS 177
           ++ ++   T   G  VD  R  +D A+ YG  P      + L +E L PV + +      
Sbjct: 118 DVPVELTTTVQHG--VDLRREGFDAAVVYGDAPNHGLQVRKLFDEQLTPVCAPSLREGPV 175

Query: 178 WLQEDWANSEAWQQVVLLHDAMPWANAARDQEWHYWAHQMGITLPER-RDHYFNRTDMAM 236
            LQ+     E   + +LLH +        + +W  W    G+TL       +F   DMAM
Sbjct: 176 PLQQ----VEDLARHMLLHPSRD------EHDWRLWLQAAGMTLATHGPKQHFETLDMAM 225

Query: 237 SAAEAGVGIAMARTALLSNELDTGRLVTPFA-PIRAKAGYFLIT 279
           + A  G G+A+   +L+ ++L  GRL  PFA  +    GY+L++
Sbjct: 226 AMASQGTGVAIGDWSLIGDDLRGGRLCMPFALKVLTGKGYYLVS 269