Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  129 bits (323), Expect = 1e-34
 Identities = 90/299 (30%), Positives = 141/299 (47%), Gaps = 23/299 (7%)

Query: 2   LKSQQVASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRL 61
           +K   + +   F   AQ  SF  AA  LH+T GA+S+Q+  LE  LG  LFER +R + L
Sbjct: 1   MKLPPLNAFRYFDIAAQTESFVRAAEHLHVTHGAVSRQIRLLEESLGVELFERRNRAIFL 60

Query: 62  TEAGRILLTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPE 121
           T AGR L  T Q  ++ +E  +  L        + L   P+ A +WL+PRL  F+  HP+
Sbjct: 61  TPAGRALQGTTQAIFEQLEGAVQRLQQQARDNVLVLSCEPTIAMRWLIPRLPRFHATHPD 120

Query: 122 IQIQTFAEGALVDSERRDYDLAIDYGALPYPRR-DAQLLMEEWLLPVMSTNYLAAHSWLQ 180
           +Q+   A G  +D  R   DLAI      +  +  +Q + +EW+ PV    + AA + L 
Sbjct: 121 LQLHLVAAGGPLDFARSGVDLAIRRDDFHWDNQLYSQKICDEWIGPVC---HPAACARLD 177

Query: 181 EDWANSEAWQQVVLLHDAMPWANAARDQEWHYWAHQMGITLPERRDHYFNRTDMAMSAAE 240
                        LLH      +  R   W  W    G          +    +++ AA 
Sbjct: 178 GQ----------RLLH------STTRPAAWPTWLRLSGQQARHCERSDYEHFYLSIQAAS 221

Query: 241 AGVGIAMARTALLSNELDTGRLVTPFAPIRAKAGYFLITHQA---TDATQVFCQWLQKQ 296
           AG+G+A+A   ++ +ELD+G+L  PF  +R  + Y L++ Q    +   Q F +W+  +
Sbjct: 222 AGLGLAIASALMVRDELDSGQLQAPFGFVRDGSAYHLLSPQPLADSGKRQRFAEWIMDE 280