Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., putative Transcriptional regulator AmpR from Pseudomonas putida KT2440

 Score =  134 bits (336), Expect = 3e-36
 Identities = 95/289 (32%), Positives = 149/289 (51%), Gaps = 17/289 (5%)

Query: 10  LHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRLTEAGRILL 69
           L  F   A+Y +F+ AA  LHLT GA+SQQ+  LE+QLG +LF+R  RG+ LTE G+  L
Sbjct: 12  LRAFEVSARYLNFTHAAEELHLTQGAVSQQIRHLESQLGVALFKRLPRGLGLTEEGQSYL 71

Query: 70  TTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPEIQIQTFAE 129
             VQ +   +    + +    +R+ ++++ + SF   WL PRL DF R HP++ I+  + 
Sbjct: 72  PVVQDAISRLAVGTNEIFGQRQRRPLKVRGSLSFLHFWLAPRLADFRRSHPQVDIRYISN 131

Query: 130 GALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQEDWANSEAW 189
             + + +  D DL I +G+  +   +AQ L  + L+PV +   LA    L+E        
Sbjct: 132 LWVKELDAED-DLEIRWGSGQWAGVEAQRLTRDMLVPVCAPALLAGCP-LRE----PRDL 185

Query: 190 QQVVLLHDAMPWANAARDQEWHYWAHQMGI-TLPERRDHYFNRTDMAMSAAEAGVGIAMA 248
            +V LLH          ++ W YW  ++G   +       F+     +  AE G+G+A+A
Sbjct: 186 ARVPLLH------VLGYEEGWGYWLERVGADQVDSSSGLQFDTLVSTLRMAELGLGVALA 239

Query: 249 RTALLSNELDTGRLVTPFAP-IRAKAGYFLIT---HQATDATQVFCQWL 293
           R++L+ + L  GRLV PFA  I A   +FL+       +   Q F  WL
Sbjct: 240 RSSLVEDLLQEGRLVAPFAQRIEASESFFLVRGLGEALSPDAQAFSHWL 288