Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., transcriptional regulator GcvA from Pseudomonas sp. SVBP6

 Score =  132 bits (333), Expect = 7e-36
 Identities = 96/292 (32%), Positives = 147/292 (50%), Gaps = 17/292 (5%)

Query: 7   VASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRLTEAGR 66
           +++L  F   A++ S +LAA  L +T GA+S Q+ +LEA LG  LF R  R + LT  G 
Sbjct: 6   LSALRAFEAAARHVSITLAARELCVTPGAVSLQIKELEAALGVQLFVRRPRSLSLTPEGE 65

Query: 67  ILLTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPEIQIQT 126
               T++ +++ I +   +L     ++ + L  TP FA +WL+PRL  F  +   + ++ 
Sbjct: 66  DYFATLRSAFRMIREATSALTTRARQQVLTLSCTPGFAVQWLLPRLGGFEAQQSGVDVRI 125

Query: 127 FAEGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQEDWANS 186
            A   LVD  R   DLA+ +G   Y    A+ L+++ L+PV S +    H+  Q +   S
Sbjct: 126 SACKRLVDFARDGIDLAVRHGYGRYDGLVAERLLDDDLVPVCSPHLRNIHALHQPNDLAS 185

Query: 187 EAWQQVVLLHDAMPWANAARDQEWHYWAHQMGITLPERR-DHYFNRTDMAMSAAEAGVGI 245
                V LLHD           +W  W    G    E      F  ++ A+ AA+AG+G+
Sbjct: 186 -----VHLLHD-------EHRHDWRMWLDAAGAPQVEASGGTLFVDSNGAIEAAKAGLGV 233

Query: 246 AMARTALLSNELDTGRLVTPFAP-IRAKAGYFLI-THQATDATQV--FCQWL 293
           A+ R   +  ELD G LVTPFA  I ++  Y+L+    A +  QV  F QWL
Sbjct: 234 ALVRRGFVQRELDEGMLVTPFAQGIASELAYYLVYPATALERPQVAGFRQWL 285