Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., Glycine cleavage system transcriptional activator from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  119 bits (297), Expect = 1e-31
 Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 17/293 (5%)

Query: 9   SLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRLTEAGRIL 68
           +L  F   A++ SF+ AA  L+LT  A+SQ +  LE +LG  LF R  RG+ LT+ G  L
Sbjct: 12  ALRAFEVSARHLSFTRAAQELNLTQTAVSQHVKNLEQRLGKPLFRRVPRGLALTDEGMAL 71

Query: 69  LTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPEIQIQTFA 128
           L T+  ++  +  T+ S   + +R+ + +    +FA  WL+PRL +F  RHP ++++ F 
Sbjct: 72  LPTLVDAFARVSATLESFKGAHKREVLSVGAVGTFAVGWLLPRLREFQARHPFVELRLFT 131

Query: 129 EGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQEDWANSEA 188
               +D      D AI +G   +P    + L+   L PV       A +      A ++ 
Sbjct: 132 NNNRIDLAAEGLDCAIRFGDGQWPGLQTRHLLAAPLAPV------CAPALAHRIRAVADL 185

Query: 189 WQQVVLLHDAMPWANAARDQEWHYWAHQMGITLPERRDHYFNRTDMAMSAAEAGVGIAMA 248
             + +L         + R  EW  W    G   P      F+ + +   AA  G G+A+ 
Sbjct: 186 GCETLL--------RSYRSDEWAQWFEAAGGRAPLLTGPMFDSSLVLADAAAQGAGVALL 237

Query: 249 RTALLSNELDTGRLVTPFAPIRAKAGYFLI---THQATDATQVFCQWLQKQIP 298
             +L + +L  GRLV  F       GY+L    T + + A + F  WL+ Q P
Sbjct: 238 PVSLFTRDLQGGRLVRLFEAEVDVGGYWLTRLKTRRKSAAMKAFQDWLELQAP 290