Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., DNA-binding transcriptional regulator DsdC from Serratia liquefaciens MT49

 Score =  127 bits (320), Expect = 3e-34
 Identities = 87/303 (28%), Positives = 146/303 (48%), Gaps = 13/303 (4%)

Query: 2   LKSQQVASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRL 61
           L S Q + LHTF  VA++ SFSLAA  L +T  A+S ++  LE +LGF LF+R  R + L
Sbjct: 14  LTSYQFSRLHTFECVARHLSFSLAAEELSITPSAVSHRINLLEKELGFLLFQRFHRRITL 73

Query: 62  TEAGRILLTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPE 121
           T  G  +   +  S+  + Q I  +        + +   PS     L+PR+ DF   HP 
Sbjct: 74  TPDGERMQWALNHSFDALTQEILDIKNRELTGSLTIYSHPSLVQCLLIPRIGDFIALHPT 133

Query: 122 IQIQTFAEGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQE 181
           I +        ++   R  DLA+ +G  P  ++  ++ M E ++P+ +  Y   H+    
Sbjct: 134 IHLNILTGQENINLANRGVDLAMYFGRPPSDKQLDEIFMRESMVPICTEKYAKTHNLYNA 193

Query: 182 DWANSEAWQQVVLLHDAMPWANAARDQEWHYWAHQMGITL-PERRDHYFNRTDMAMSAAE 240
               ++      LLHD     N+  D EW  W+    + L  + +   F+R+D+A+ AA 
Sbjct: 194 PGNLADC----TLLHDRY---NSGED-EWQIWSQHFDLGLDTDAKSMEFDRSDLAVLAAT 245

Query: 241 AGVGIAMARTALLSNELDTGRLVTPFAP--IRAKAGYFLITHQATDATQV--FCQWLQKQ 296
             +G+AM R  L+ + + +G L+ PF    +  +  YF+ T       ++  F +W+ K 
Sbjct: 246 QHLGVAMGRLNLVQDWIKSGELIIPFTDMILPCEHSYFMSTLSGRQWPKIIAFKEWMMKI 305

Query: 297 IPV 299
            P+
Sbjct: 306 TPL 308