Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., Glycine cleavage system transcriptional activator GcvA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  131 bits (329), Expect = 2e-35
 Identities = 88/290 (30%), Positives = 140/290 (48%), Gaps = 16/290 (5%)

Query: 9   SLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRLTEAGRIL 68
           +L  F   A++ SF+ AA  L +T  A+S Q+  LE  LG  LF R +R + LTE G+  
Sbjct: 10  ALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLLLTEEGQSY 69

Query: 69  LTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPEIQIQTFA 128
              ++  +  + +    L   + +  + + L PSFA +WLVPRL  F   +P I ++  A
Sbjct: 70  FLDIKEIFSQLTEATRKLQARSAKGALTVSLPPSFAIQWLVPRLSSFNSAYPGIDVRIQA 129

Query: 129 EGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQEDWANSEA 188
                D    D D+AI YG   +P    + L  E+LLPV S   L     L+      E 
Sbjct: 130 VDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKPLK----TPED 185

Query: 189 WQQVVLLHDAMPWANAARDQEWHYWAHQMGIT-LPERRDHYFNRTDMAMSAAEAGVGIAM 247
             +  LLHD       A  ++W  +  Q+G+  +  ++   F+ + M + AA  G GIA+
Sbjct: 186 LAKHTLLHD-------ASRRDWQAYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGIAL 238

Query: 248 ARTALLSNELDTGRLVTPFAPIR-AKAGYFLITHQA---TDATQVFCQWL 293
           A   +  +E++ GRLV PF  +  +K  ++L+ H +         F QW+
Sbjct: 239 ANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWI 288