Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., CP4-6 prophage; predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  122 bits (306), Expect = 1e-32
 Identities = 94/295 (31%), Positives = 144/295 (48%), Gaps = 22/295 (7%)

Query: 10  LHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVRLTEAGRILL 69
           L  F    +  +F+LAA+ L L+  AIS  + +LE  L   LF+R +R + LT+ G ILL
Sbjct: 12  LRAFEAAGRTGAFALAASELELSPSAISHAIRKLENLLDVRLFQRSTREITLTKEGEILL 71

Query: 70  TTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHPEIQIQTFAE 129
             +QR + +++Q + +LV + E + +RL   PSFA +WL+PRL  F R +P I ++  A 
Sbjct: 72  EHIQRGFNELQQGL-ALVTADESRPLRLHTAPSFAHQWLLPRLGKFIRENPSIDLRLSAS 130

Query: 130 GALVDSERRDYDLAIDYG-ALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQEDWANSEA 188
                 E+ D+DL I YG   P P     L +EE L P+ S   LA      ED      
Sbjct: 131 TEYARFEQDDFDLDIVYGEPRPSPYEKIPLAVEE-LTPLCSPQ-LAERLKKPEDLYALTL 188

Query: 189 WQQVVLLHDAMPWANAARDQEWHYWAHQMGITLPERRDHYFNRTDMAMSAAEAGVGIAMA 248
            Q  V L+            +W  W     +T P      F+R+ MA++AA  G+G+ + 
Sbjct: 189 IQCDVQLY------------QWKGWFEANKMTPPNNYGLRFDRSFMAIAAAVDGLGVVLE 236

Query: 249 RTALLSNELDTGRLVTPFAPIRAK---AGYFLITHQ---ATDATQVFCQWLQKQI 297
              L   E+ +G+LV P     ++    G++L+  Q      A  VF  WL  ++
Sbjct: 237 SKLLAEREIASGKLVCPLVNSTSEIHYIGHYLVFPQHQHMHSALDVFKTWLLNEL 291