Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., D-serine deaminase transcriptional activator from Enterobacter asburiae PDN3

 Score =  153 bits (386), Expect = 6e-42
 Identities = 94/299 (31%), Positives = 146/299 (48%), Gaps = 8/299 (2%)

Query: 1   MLKSQQVASLHTFMQVAQYTSFSLAAAALHLTTGAISQQMLQLEAQLGFSLFERHSRGVR 60
           +L   Q++ ++TF   A++ SF+LAA  L L+  A+S ++  LE +LG  LF R  R V 
Sbjct: 11  LLNGWQLSKMYTFEVAARHESFALAAEELSLSPSAVSHRINLLEEELGIQLFVRSHRKVE 70

Query: 61  LTEAGRILLTTVQRSYQDIEQTIHSLVPSTERKEIRLKLTPSFAFKWLVPRLEDFYRRHP 120
           LT+ G+ +  T++ S   + Q I  +        + +   PS A  WLVP L DF RR+P
Sbjct: 71  LTKEGKRVYWTLKSSLDTLNQEILDIKNQALSGTLTVYSRPSIAQCWLVPMLGDFTRRYP 130

Query: 121 EIQIQTFAEGALVDSERRDYDLAIDYGALPYPRRDAQLLMEEWLLPVMSTNYLAAHSWLQ 180
            I +        V+ +R   DLA+ +   P        LM+E +LPV S  Y   H  L+
Sbjct: 131 SISLTILTGNDYVNMQRTGVDLALYFDDTPPNHLSHHFLMDEEILPVCSPQYAREHELLK 190

Query: 181 EDWANSEAWQQVVLLHDAMPWANAARDQEWHYWAHQMGITLPERRDHYFNRTDMAMSAAE 240
               N +      LLHD   W+N +   EW  WA    + +P      F+R+D+A+ AA 
Sbjct: 191 ----NPDNLSHCTLLHDRQAWSNDSGTDEWLSWAQHFSVNMPPSSGISFDRSDLAIIAAI 246

Query: 241 AGVGIAMARTALLSNELDTGRLVTPFA--PIRAKAGYFLITHQATDATQV--FCQWLQK 295
             VG+AM R  L+   L+ G L+ PF    ++    Y++ T       ++  F  WL++
Sbjct: 247 NHVGVAMGRKRLVQKRLERGELIAPFGEKTLKCHQHYYISTLSGRQWPKIDAFIGWLRE 305