Pairwise Alignments

Query, 421 a.a., D-amino acid dehydrogenase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., D-amino acid dehydrogenase (EC 1.4.99.6) from Variovorax sp. SCN45

 Score =  309 bits (792), Expect = 9e-89
 Identities = 164/409 (40%), Positives = 241/409 (58%), Gaps = 9/409 (2%)

Query: 2   MEVLVLGSGVVGLTSAWYLAQAGHDVTVVDRQPRGAEETSFANAGQISYGYSSPWAAPGI 61
           M V+VLG+G++G+TSA+YL Q GH+VTV+DRQ   A ETSFAN GQIS  ++ PWA P  
Sbjct: 1   MRVIVLGAGLLGVTSAYYLQQLGHEVTVIDRQATPAAETSFANGGQISVSHAEPWANPSA 60

Query: 62  PQKALKWMLEKHAPLKIQPSLDPALLSWMGKMLLNCQLSRYQVNKSRMLAIANYSRECLK 121
           P K L+W+ ++ APL  +   D     W  + L  C  +R + N  +++ +  YSRE L+
Sbjct: 61  PLKVLQWLGKEDAPLLFRIRADMRQWLWGLQFLRECTPARTRHNIEQIVRLGTYSREMLQ 120

Query: 122 ALNQTYSLDYQGRQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLA 181
            L +  SLDY  R +G L  +  +K+        + +   G   ++++  + +  EP LA
Sbjct: 121 QLRRDTSLDYDQRTQGILHFYTTQKEFDGALAPAEQMRALGCERQVISADEAVKIEPALA 180

Query: 182 PVQEKLVGGLWLPDDETGDCYLFCQQLTELAKQQGVRFHFDCHIQQLVCEGKKIIGVQ-T 240
            ++ KL G  +  +DE+GD   F ++L+ LA + GV+F     +  L   G  I  V+ T
Sbjct: 181 HIRPKLAGATYTAEDESGDANRFARELSRLAAEAGVKFLMSHTVTALREAGGGIDHVEVT 240

Query: 241 D----LGLLKADAYVVALGSYSTSLLKPLGIEIPVYPVKGYSLTLPIIDEKFAPQSTVMD 296
           D       ++ DA+V+A+GS S  L  PLGI +P+YP KGYS+TLP+ D   A Q ++ D
Sbjct: 241 DAEGRFQRIRGDAFVMAMGSLSPLLAAPLGIRLPIYPAKGYSVTLPVKDASKAHQVSLTD 300

Query: 297 ETYKVALTRFS----DRIRVAGTAELAGFDPAIPEARKATIEMVARDLFPHGGDFAKGQF 352
           + +K+  +R++    DR+R+AGTAEL G+D  +   R   I     +LFP  GD  + QF
Sbjct: 301 DEFKLVFSRYTSESGDRLRIAGTAELNGYDRDLNRVRCEAIVRRVEELFPGAGDTTRAQF 360

Query: 353 WTGFRPMTPDGTPIIGATPYTNLYTNTGHGTLGWTMACGSASILADVLT 401
           WTG RP TP   P+IG T   NL+ NTGHGTLGWT ACGS   +A +++
Sbjct: 361 WTGLRPATPSNVPLIGKTKLANLFLNTGHGTLGWTHACGSGKSIARIVS 409