Pairwise Alignments

Query, 421 a.a., D-amino acid dehydrogenase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  120 bits (302), Expect = 6e-32
 Identities = 110/396 (27%), Positives = 172/396 (43%), Gaps = 15/396 (3%)

Query: 6   VLGSGVVGLTSAWYLAQAGHDVTVVDRQPRGAEETSFANAGQISYGYSSPWAAPGIPQKA 65
           V+G+G+VGL+ A  L + G+ VTV+DR+   A   SF NA  I+     P AAPGI ++ 
Sbjct: 7   VVGAGLVGLSCARALQREGYAVTVLDREGVCAG-ASFGNAAHIATASVLPQAAPGILRQF 65

Query: 66  LKWMLEKHAPLKIQPSLDPALLSWMGKMLLNCQLSRYQVNKSRMLAIANYSRECLKALNQ 125
            +   +   PL  +P        W  + L   + SRYQ     M  +   +    + L  
Sbjct: 66  WRLARDPEGPLIARPGYVLRRADWFARFLAQARPSRYQAGAQAMAGLMAQAWPAWRTLLA 125

Query: 126 TYSLDYQGRQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQE 185
             +     R+ G L VF         +    L  Q GV  E L   +    EP L P   
Sbjct: 126 DTAATDLMRETGALHVFGSPAARAQAQAAYALRRQLGVPCEDLTGDEARELEPALGP--- 182

Query: 186 KLVGGLWLPD-DETGDCYLFCQQLTELAKQQGVRFHFDCHIQQLVCEGKKIIGVQTDLGL 244
            +   + +P      D      ++    + +G R      + Q+  +G ++ G       
Sbjct: 183 SVQAAVHIPGMGFVTDTQALAHRIAARIQAEGGRIEI-AEVTQIGPQGVQVAGAGR---- 237

Query: 245 LKADAYVVALGSYSTSLLKPLGIEIPVYPVKGYSLTLPIIDEKFAPQSTVMDETYKVALT 304
             AD  V+A G++S    + LGI++PV   +GY L LP      A +  V+    K+A+T
Sbjct: 238 -VADLTVLAAGAWSDRWARALGIDVPVVAERGYHLMLPATAS--ALKMPVLLTEKKIAVT 294

Query: 305 RFSDRIRVAGTAELAGFDPAIPEARKATIEMVARDLFPHGGDFAKGQFWTGFRPMTPDGT 364
                +R+A  AE A  D A P+  +A+        +  G +      W G RP TPD  
Sbjct: 295 PMRQGLRLASVAEFAPPD-APPDFDRASRVFQGLSGWVPGLEQPAVSAWVGPRPSTPDSR 353

Query: 365 PIIGATP-YTNLYTNTGHGTLGWTMACGSASILADV 399
           PIIG +P + ++    GHG LG ++A  +   +AD+
Sbjct: 354 PIIGRSPRFPSVIAACGHGHLGLSLAAITGQAVADL 389