Pairwise Alignments

Query, 516 a.a., alanine:cation symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., Amino-acid carrier protein AlsT from Xanthobacter sp. DMC5

 Score =  347 bits (890), Expect = e-100
 Identities = 204/484 (42%), Positives = 293/484 (60%), Gaps = 53/484 (10%)

Query: 1   MQSFVDFLNGIIWSPALIYLCLGAGLFYSVLTRFVQVRHFFEMWRLLLNNKESSK-GISS 59
           M + +DFLN I W   LIY  L  G+++++   FVQ+ HF EM R +L + ++ K GI+ 
Sbjct: 1   MDAVIDFLNTIFWGYVLIYGLLAVGVYFTLRLGFVQIVHFPEMLRSVLRSNDTDKSGITP 60

Query: 60  FQALAVSLSGRVGTGNIAGVAAAIGFGGPGAVFWMWMVAFFGAATAYAESTLAQIYK-EE 118
           FQAL  SL+ RVGTGNIAGVA A+  GGPGA+FWMW+VA  G ATA+AESTLAQ+YK ++
Sbjct: 61  FQALCTSLASRVGTGNIAGVAVALTLGGPGAIFWMWVVAALGMATAFAESTLAQLYKVKD 120

Query: 119 DNGEFRGGPAYYIEKAMGQKWYAWVFAIATIFACGVLLPGVQSNSIGNAVESAFGSGPMI 178
           D G +RGGPA+YI   +   W   +F++  I + G++   VQ+NSI +AVE AFG     
Sbjct: 121 DEGRYRGGPAFYIAHGLKASWAGGLFSVCLIISFGLVFNAVQANSIADAVEGAFG----- 175

Query: 179 ETALGTFSFAKIFTGTVISILLGFIIFGGVKRIASFTQIVVPFMALAYIITAFVIILLNI 238
                     K+ TG V+++L G IIFGG+  IA   + VVPFMALAY+  AF  +  +I
Sbjct: 176 --------VPKLGTGLVVAVLSGVIIFGGIATIARTAEFVVPFMALAYVGLAFYALATHI 227

Query: 239 GEVPRIIAMIVGDAFSPMAGVGAAIGW-----------GVKRGVYSNEAGQGTGPHAAAA 287
             VP ++  IVG AF    GVGAA G            GVKRG++SNEAG G+ P+ AA 
Sbjct: 228 ALVPSVLGHIVGSAF----GVGAAAGGVAGSVAAAMMNGVKRGLFSNEAGMGSAPNIAAV 283

Query: 288 ASVE--HPAQQGLVQSFSIYIDTLMVCSATAFMILITGAYNVHGAAEGMFLVQNLPADII 345
           A+ +  HP  QG VQS  ++IDT+++C+ATA +IL++    V  +AE             
Sbjct: 284 ATPDPHHPVSQGFVQSLGVFIDTIVICTATALLILLS---EVVPSAE------------- 327

Query: 346 ASSPAFTQIAVDSALPGIGKPFVAFALFFFAFTTILAYYYIAETNVAYIRRTFKVDGLMF 405
            +    TQ A++  +  +G+ FVA A+FFFAFT+I+  Y  AE  + ++     V G++ 
Sbjct: 328 LTGTQLTQAALEVHVGWLGRYFVAIAIFFFAFTSIIGNYSYAENALVFLGHG-HVSGVI- 385

Query: 406 VLKLVLMASVFYGTVKTANLAWALGDVGVGLMAWLNIVGIIIIFFMSKPTMAALKDYEDQ 465
           VL+L L+A V +G++++    +   D  +GLMA +N+V I++   +S   +   KDY  Q
Sbjct: 386 VLRLALLAMVVWGSLQSVATVFNAADASMGLMASINLVAIVL---LSGTVVRLTKDYLAQ 442

Query: 466 QKQG 469
           +K G
Sbjct: 443 RKAG 446