Pairwise Alignments

Query, 516 a.a., alanine:cation symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., sodium:alanine symporter from Pseudomonas simiae WCS417

 Score =  324 bits (830), Expect = 5e-93
 Identities = 182/478 (38%), Positives = 288/478 (60%), Gaps = 45/478 (9%)

Query: 6   DFLNGIIWSPALIYLCLGAGLFYSVLTRFVQVRHFFEMWRLLLNNKESSKG-ISSFQALA 64
           DFL+G +    LI L +G G ++++ +RFVQ+RHFF M+ +  ++ +SS G +SSFQAL 
Sbjct: 7   DFLSGKV----LIVLIVGLGGYFTIRSRFVQLRHFFHMFSVFKDSLKSSAGQLSSFQALM 62

Query: 65  VSLSGRVGTGNIAGVAAAIGFGGPGAVFWMWMVAFFGAATAYAESTLAQIYKEED-NGEF 123
           +SL+GRVG GNIAGV  A+  GGPGAVFWMW+ A  G ++++ E +L Q+YK  D  G +
Sbjct: 63  LSLAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMSSSFIECSLGQLYKRTDAEGTY 122

Query: 124 RGGPAYYIEKAMGQKWYAWVFAIATIFACGVLLPGVQSNSIGNAVESAFGSGPMIETALG 183
           RGGPAYYI+  + ++W   V A   +   G    G+Q++++ +++ +AFG    ++T   
Sbjct: 123 RGGPAYYIQHGLQKRWLGMVMAFLLLVTFGFAFNGLQAHAVTHSLNNAFG----LDTT-- 176

Query: 184 TFSFAKIFTGTVISILLGFIIFGGVKRIASFTQIVVPFMALAYIITAFVIILLNIGEVPR 243
                  +TG  +++LLG +  GG+KRIAS   ++VP   L YI     +I+L    VP 
Sbjct: 177 -------YTGLALAVLLGLVFIGGIKRIASIADLLVPVKTLVYIAVTLYVIVLQFDHVPA 229

Query: 244 IIAMIVGDAFS---PMAG-VGAAIGWGVKRGVYSNEAGQGTGPHAAAAASVEHPAQQGLV 299
           ++A IV  AF       G VG+AI  GVKRGV++NEAG G+ P+ AA ASVEHP  QG+V
Sbjct: 230 MLATIVKSAFGLDQAFGGLVGSAIIMGVKRGVFANEAGLGSAPNVAAVASVEHPIAQGVV 289

Query: 300 QSFSIYIDTLMVCSATAFMILITGAYNVHGAAEGMFLVQNLPADIIASSPAFTQIAVDSA 359
           Q+FS+++DT ++C+ TA +IL++G Y      +G+ L QN  A ++              
Sbjct: 290 QAFSVFLDTFVICTCTALLILLSGFYTPGFEGDGIALTQNSLAAVVGD------------ 337

Query: 360 LPGIGKPFVAFALFFFAFTTILAYYYIAETNVAY-IRRTFKVDGLMFVLKLVLMASVFYG 418
               G+ F++ AL  F FT+I+  YY+ E+N+ + +    KV  LM    LVL+  +F+G
Sbjct: 338 ---WGRMFISVALALFVFTSIMYNYYLGESNLRFLVGNNRKV--LMGYRALVLVL-IFWG 391

Query: 419 TVKTANLAWALGDVGVGLMAWLNIVGIIIIFFMSKPTMAALKDYEDQQKQGVTEFTFN 476
           +++  +  +A  D+ + ++A++N+  +  +F   K  M  L DY++Q+  G+    F+
Sbjct: 392 SIENLSTVFAFADITMTMLAFVNLFALAFLF---KIAMRILNDYDNQRAAGIKTPVFD 446