Pairwise Alignments

Query, 516 a.a., alanine:cation symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Amino-acid carrier protein AlsT from Alteromonas macleodii MIT1002

 Score =  325 bits (832), Expect = 3e-93
 Identities = 187/479 (39%), Positives = 278/479 (58%), Gaps = 44/479 (9%)

Query: 1   MQSFVDFLNGIIWSPA--LIYLCLGAGLFYSVLTRFVQVRHFFEMWRLLLNNKESSK-GI 57
           +  FV  +N I+W     LI + L  G++++V    VQ+RHF  M+ LL  +  S+K GI
Sbjct: 2   INEFVSLVNNILWGDGQVLIIMLLACGIWFTVKLGGVQLRHFGHMFSLLKGSNTSTKDGI 61

Query: 58  SSFQALAVSLSGRVGTGNIAGVAAAIGFGGPGAVFWMWMVAFFGAATAYAESTLAQIYK- 116
           SSFQAL  SLS RVGTGN+AGVA AI  GG GA+FWMWM+A  G AT +AES L Q+YK 
Sbjct: 62  SSFQALCTSLSARVGTGNLAGVAVAISLGGAGAIFWMWMIALLGMATGFAESVLGQLYKV 121

Query: 117 EEDNGEFRGGPAYYIEKAMGQKWYAWVFAIATIFACGVLLPGVQSNSIGNAVESAFGSGP 176
            ++NGEFRGGPAYYI++ + + W A  F++   F  G +   VQ+N+I +A+ +A     
Sbjct: 122 RDENGEFRGGPAYYIKQGLNKTWLAVAFSLCLFFGYGFVFSAVQANTITDALNNA----- 176

Query: 177 MIETALGTFSFAKIFTGTVISILLGFIIFGGVKRIASFTQIVVPFMALAYIITAFVIILL 236
                   +SF   + G  I  L   I+ GG+K IA F + VVPFM + Y++ A  I  +
Sbjct: 177 --------YSFPTEYVGLAIIALAALIVVGGLKSIARFAEFVVPFMGIGYVLVALAITFI 228

Query: 237 NIGEVPRIIAMIVGDAF----SPMAGVGAAIGWGVKRGVYSNEAGQGTGPHAAAAA--SV 290
           NI E+P ++  IV  AF    +    +GAAI  G++RG+YSNEAG G+ PHAAA+A  + 
Sbjct: 229 NISELPAMLLDIVKSAFGLQEAGAGALGAAIKNGIQRGLYSNEAGSGSVPHAAASAVPNP 288

Query: 291 EHPAQQGLVQSFSIYIDTLMVCSATAFMILITGAYNVHGAAEGMFLVQNLPADIIASSPA 350
            HP  QG +Q   +++DTL++C++TAF+IL+ G  +     EG+ L              
Sbjct: 289 NHPVSQGYIQMLGVFLDTLVLCTSTAFIILLAGG-SSSDQMEGIRL-------------- 333

Query: 351 FTQIAVDSALPGIGKPFVAFALFFFAFTTILAYYYIAETNVAYIRRTFKVDGLMFVLKLV 410
            TQ A+ S L   G  FVA A+  FAFT+++A Y   E+N+   +   K+   ++ +  +
Sbjct: 334 -TQDAMSSHLGEGGTDFVAAAISLFAFTSVVANYAYGESNLHMFKLDNKIGRAVYTIGYL 392

Query: 411 LMASVFYGTVKTANLAWALGDVGVGLMAWLNIVGIIIIFFMSKPTMAALKDYEDQQKQG 469
            M  +++G        WA+ D+ +GLM  +NI+ I+   +M+   ++  KDY  ++  G
Sbjct: 393 GM--IYWGAQAALPQVWAMADMALGLMTVINIIAIV---WMTPTIVSISKDYFKKKDSG 446