Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  119 bits (297), Expect = 1e-31
 Identities = 83/296 (28%), Positives = 144/296 (48%), Gaps = 8/296 (2%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           L   DLNL  VFD++    ++++A   +G+T  AVS  L+RLRE   DPLF+R  +G+ P
Sbjct: 3   LSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGMVP 62

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           T  A N+   V   LS +R  ++    F+P  + + + I      + V+LP L Q++  +
Sbjct: 63  TPMAQNIIGPVRNALSLLRVSVQESRIFNPQQAAKTYRISMTDLTEAVILPLLFQRLRRL 122

Query: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHP 183
           AP  TV ++S+       ++ L+    D  + A   + P +   ++ E+  V    K HP
Sbjct: 123 AP--TVVIESFLSKRRETTKELAAGRLDFAVDAPLNTDPQVRHVKLMEDRYVCAMRKGHP 180

Query: 184 RLG-STLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVT 242
             G   L+ + +    H  ++SRR G       + ++   R++  +S+  L        T
Sbjct: 181 LAGKDKLTLDDYLGLTHIHISSRRNGLGHVDLALGKMGLQRKIALRSQHYLMASQVLQQT 240

Query: 243 DLLCFTPKRLADMWAEKLGLQIQPLPF-EIRSVPTFMCWHKAKQQDKGLIWLREQI 297
           D++   P+R    +A +  L    LP  ++  V T + WH++  QD    W+REQ+
Sbjct: 241 DMVMTVPER----FARRHELHWFNLPVNDVPPVETHLYWHESTDQDPANRWMREQM 292