Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  110 bits (275), Expect = 4e-29
 Identities = 86/308 (27%), Positives = 145/308 (47%), Gaps = 12/308 (3%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           LR  DLNLL VF+++M   SV++AA+KL +   A+S  LSRLR    DPLF+R GR ++P
Sbjct: 6   LRRVDLNLLIVFETLMHERSVTRAAEKLFLGQPAISAALSRLRGLFDDPLFVRTGRSMEP 65

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           +  A+ +   ++  L +I   +   A FDPATS   F IG     +  +LP LL+++   
Sbjct: 66  SARAVEIFALLSPALDSISTAVSRAAEFDPATSTAVFRIGLSDDVEFALLPQLLKRLRAE 125

Query: 124 APHITVNLKSYEDDHFTPSQVLSEREADL---FLAALPISHPSIVTTQVAEEALVVVYAK 180
           AP I + ++    ++     +L+  E  +   + A LP +    V  +   + L      
Sbjct: 126 APGIVLVVRRV--NYILMPGLLASGEISIGVSYTADLPANAKRKVLRRSLPKLL------ 177

Query: 181 NHPRLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATAS 240
               +  +LS + F A  H  ++     +      ++++   R V         L    +
Sbjct: 178 RADSVPGSLSLDDFCARPHALVSFAGDLSGFIDEELEKLDRKRHVVLAVPQFNGLGTLLA 237

Query: 241 VTDLLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQIEAI 300
            TD+L   P   A+      GL+ +  P  +RS    M W  ++  D G  WLR +I+ +
Sbjct: 238 GTDILATVPDYAAEALTSAGGLRAEDPPLPVRSFELHMAWRGSQDNDPGERWLRSRIQ-M 296

Query: 301 LCANPQSI 308
              +P+S+
Sbjct: 297 FFGDPESL 304