Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  109 bits (272), Expect = 9e-29
 Identities = 82/298 (27%), Positives = 129/298 (43%), Gaps = 4/298 (1%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           LR  DLNLL + D+++    V++AA++L ++  AVS  L+RLR+ +GDPL +RQG  L P
Sbjct: 10  LRRIDLNLLVILDALLSEQHVTRAAERLHLSQPAVSHALARLRDLLGDPLLVRQGGSLVP 69

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           T  AL +   + E L  ++  L     FDPA++KR F +    Y   + LP L++ +   
Sbjct: 70  TARALELAPPLTEALGQVQ-ALLAPNRFDPASAKRRFRVAMSDYSAAIFLPDLVRTLRRE 128

Query: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHP 183
           AP I + +     +       +   + DL     P     + TT + EE    +  ++  
Sbjct: 129 APGIDLQIIQASREGMVDG--VLNGDLDLAAGVFPDMPAELRTTPLFEEHYTCLVDRDSL 186

Query: 184 RLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVTD 243
               TL    + +  H  L  R  G       +  +   R V                TD
Sbjct: 187 PASGTLDLPTYLSRPHVLLEMRGSGTPEIERALTTIRERRHVAISLPHWGVAPQLIQGTD 246

Query: 244 LLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQIEAIL 301
           L+     R   +  +   L   P PF I S    + WH  +  D GL WL  Q++ +L
Sbjct: 247 LILTVSSR-GLLNIDHQHLLAVPAPFHIPSFAFELAWHARRGGDSGLQWLIGQVQGVL 303