Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., no description from Variovorax sp. SCN45

 Score =  115 bits (287), Expect = 2e-30
 Identities = 84/291 (28%), Positives = 130/291 (44%), Gaps = 3/291 (1%)

Query: 7   YDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQPTQY 66
           +DLNLL V  ++    SV+ AA  LGM+ +  S  L+RLR+  GDPLF+R   G+ PT  
Sbjct: 12  FDLNLLRVVVTLGNTRSVTHAAAALGMSQSGFSSALARLRQLCGDPLFVRTASGMSPTPR 71

Query: 67  ALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDIAPH 126
           A  M       L+ +  G+     FD AT++ EF +      ++V LP LL+     APH
Sbjct: 72  AERMVATARSVLAQVAEGVLGQPEFDAATTRTEFRLAMADVAEIVFLPRLLRHFQVHAPH 131

Query: 127 ITVNLKSYEDDHFTPSQVLSEREADLFLAALP-ISHPSIVTTQVAEEALVVVYAKNHPRL 185
             V   +  +      Q ++  E DL L   P ++  S    ++       +  K HP  
Sbjct: 132 ARVVCVTLPNGPL--QQAMASGEIDLALGYFPDLNAQSFFRQRLYVHTYACMVRKGHPLE 189

Query: 186 GSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVTDLL 245
           GS L+ + +    H  + S    N  F   + +    RR+   ++  ++L A    TDLL
Sbjct: 190 GSRLTQKAYLNHGHADVASPARSNEFFDKFLTRRGLQRRIVLSTQHHMSLPAIIEATDLL 249

Query: 246 CFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQ 296
              P      +A+   +Q+  LPF+  +      WH+    D    WLR Q
Sbjct: 250 ATVPLATGARFAQLGAVQLLGLPFQPPTFAVQAHWHRLVHHDARNRWLRSQ 300