Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  130 bits (327), Expect = 4e-35
 Identities = 87/301 (28%), Positives = 148/301 (49%), Gaps = 16/301 (5%)

Query: 2   IMLRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGL 61
           + L+D DLNLL VFD ++    VS  A+ LG++  A+S  L+RLR+ +GD LF+R  RG+
Sbjct: 1   VQLKDIDLNLLLVFDRMLAEKRVSAVAESLGLSQPAISNALARLRKLLGDELFLRTARGM 60

Query: 62  QPTQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKIS 121
           +PT +AL + + VA  + A+   L     FDPATS R F +      ++   P L++ +S
Sbjct: 61  EPTPFALQLAEPVAYAMGALHTALNQQVVFDPATSTRSFTLAMTDIGEIYFTPKLMEALS 120

Query: 122 DIAPHITVNLKSYEDDHFTPSQVLSEREA---DLFLAALPISHPSIVTTQVAEEALVVVY 178
             AP +TV+       + T + +  E EA   D+ +  LP     +   ++  +  V ++
Sbjct: 121 VAAPGVTVSTLR----NNTATNLRDELEAGHVDIAIGLLPQLKAGVFQRRLFLQQYVCLF 176

Query: 179 AKNHPRLGS-TLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPA----RRVHYQSESML 233
           ++ HP     ++S + F A  H  + +   G+       D V+ A    RR+  +    +
Sbjct: 177 SQAHPLAKKRSVSLKDFSAADHVQVLAAGTGH----GKADDVMAAQGIQRRIKLRVPHFV 232

Query: 234 NLMATASVTDLLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWL 293
            +      + ++   P+RLA   AE  GL  +P P  +  +   + WH    +D G  W+
Sbjct: 233 AIGHILHSSHMIATVPERLAQSIAEPFGLVWRPHPVALPQIAINLFWHAKAHRDPGNQWM 292

Query: 294 R 294
           R
Sbjct: 293 R 293