Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  105 bits (262), Expect = 1e-27
 Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 12/299 (4%)

Query: 8   DLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQPTQYA 67
           DL+L+ V  +V+   SVS+AA +LGM   AVS  L RLRE  GDPL +R G G+ PT   
Sbjct: 11  DLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRSGSGMVPTDAG 70

Query: 68  LNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDIAPHI 127
           L M +  A  L A         GFDP ++   F I    Y D + LP L+ ++   AP  
Sbjct: 71  LRMIEPAASILRAAEMLFSDARGFDPQSAATTFRIAASDYMDPLFLPMLVAQVKRDAPLC 130

Query: 128 TVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHPRLGS 187
            + + +   D       L+  + DL +         +   ++  + +V +  K+HP +  
Sbjct: 131 QIEIHALSPDSDYHGH-LALGQVDLVIGNWLKPPEDLHMARLFGDEVVSLVNKDHPAVRR 189

Query: 188 TLSFEQFFAEKHTALTSRR-FGNYLFSSLVDQV-----LPARRVHYQSESMLNLMATASV 241
               E + A +H A T     G  +   ++D++     + AR  H+    ++  M  +S+
Sbjct: 190 GWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITARCAHF---GLIPDMVASSL 246

Query: 242 TDLLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQIEAI 300
             L+  T ++  + +A +L L I   P  +  +  +  WH+         WLRE I+ +
Sbjct: 247 --LVLTTGRQYCERFAARLPLAILECPVALPRLMYYQLWHERTHSSSSARWLRECIKDV 303