Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  139 bits (350), Expect = 9e-38
 Identities = 93/300 (31%), Positives = 152/300 (50%), Gaps = 15/300 (5%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           +R  D+ +L  FD++M+  SVS+AA +L ++  AVS +L+RLR+  GDPLF R  RG++P
Sbjct: 6   IRSLDVGMLRTFDALMRERSVSRAATRLFLSQPAVSASLNRLRDTFGDPLFTRTARGVEP 65

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           T  A  +   V   L+ +   LE   GFDPA S+R F I G  Y   ++LP L  ++  +
Sbjct: 66  TARAHALAGQVERVLADLSAMLEPGEGFDPAASQRIFRISGGDYASHLLLPTLANEL--V 123

Query: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHP--SIVTTQVAEEALVVVYAKN 181
           A    V +        T ++ L  R+ D  +A LP   P     +  + E+  VV   + 
Sbjct: 124 ACGSRVRIYWETSSFLTLTERL--RKGDFDIAVLPRLQPPSDCESALLYEDRYVVAVRRG 181

Query: 182 HPRLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLP----ARRVHYQSESMLNLMA 237
           HP LG   + + F    H  L    +G+     L+DQVL      R +     S   ++ 
Sbjct: 182 HPTLGREATLDAFCGAPHVFL---GYGSSALDDLIDQVLARLGRTRTMSVAMTSFGQIVD 238

Query: 238 TASVTDLLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQI 297
             + TD +   P R+A+ + + L   + PLPFE++   + +CW++    D G++WL++ +
Sbjct: 239 LLAQTDHVAVMPLRVAERFRDVLA--VHPLPFELQGYRSVVCWNRRSNSDAGVLWLKDAL 296