Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., Transcriptional regulator, LysR family from Sphingobium sp. HT1-2

 Score =  140 bits (354), Expect = 3e-38
 Identities = 92/296 (31%), Positives = 146/296 (49%), Gaps = 4/296 (1%)

Query: 7   YDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQPTQY 66
           YDLNLL +F ++M+  SV++AA+++GMT  A+S  LSRLR  + D LF+R+  G+QPT  
Sbjct: 3   YDLNLLPIFVALMEERSVTRAAERMGMTQPALSNALSRLRLMLQDQLFVRERYGIQPTPI 62

Query: 67  ALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDIAPH 126
           AL +   +AE L+ +   +     FDP  ++R F I   GY + V++P ++ ++  +AP 
Sbjct: 63  ALELSPLIAEALAQLDNAVLGQQAFDPVKAERLFTIAPNGYVEFVLVPAIVARLEKVAPG 122

Query: 127 ITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHPRLG 186
           I + L  Y +D    + V+S   A L L  +     ++V   + +E L      +HP +G
Sbjct: 123 IKLRLTPYGND-LVETGVVSGTTA-LVLGRIVDPPDNLVVQHLMDEGLACAVRTDHPGVG 180

Query: 187 STLSFEQFFAEKHTALT-SRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVTDLL 245
             ++ EQF   KH  +    R    LF +L  Q L  R V     +        +VTD  
Sbjct: 181 DVMTREQFETMKHVNIVPPGRMRAGLFQALAQQQL-KRDVAISVTNFFAAAEMVAVTDYC 239

Query: 246 CFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQIEAIL 301
              P  +         L++ P P ++ S P  M WH   + D    WLR  I  ++
Sbjct: 240 ATLPTLICRQLMHDPRLKVLPAPVDLGSFPVEMAWHVRYRHDPAHRWLRALIGEVI 295