Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  135 bits (339), Expect = 2e-36
 Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 6/294 (2%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           L   DLNL  VFD++    ++++A   +G+T  AVS  LSRLRE   DPLF+R  +G+ P
Sbjct: 3   LSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALSRLRETFNDPLFVRTAQGMVP 62

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           T  A N+   V   L+ +R  ++    F+P  + + F I      + V+LPPL Q++  +
Sbjct: 63  TPMAQNIIGPVRNALALLRTSVQESRTFNPQQANKTFRISMTDLTEAVILPPLFQRLRRL 122

Query: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHP 183
           AP   V ++S+       ++ L+    D  + A   + P +   ++ ++  V    + HP
Sbjct: 123 AP--AVMIESFLCKRRETTKELAAGRLDFAIDAPLNTDPQVRHIKLMQDRYVCALRQGHP 180

Query: 184 RLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVTD 243
              S L+ + +    H  ++SRR G       + ++   R+V  +S+  L        TD
Sbjct: 181 LADSKLTLDSYLGMTHIHISSRRNGLGYVDLALGKMGVQRKVALRSQHYLMASQVLQQTD 240

Query: 244 LLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQI 297
           +    P+R    +A +  L+ Q LP E+ ++ T + WH++  QD    W+REQI
Sbjct: 241 MAMTVPER----FARRHQLRYQALPVEVPALETHLYWHESTDQDPANRWMREQI 290