Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  134 bits (337), Expect = 3e-36
 Identities = 81/300 (27%), Positives = 141/300 (47%), Gaps = 4/300 (1%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           +R  DLNLL + D + +  ++S AA +LGM+    S +L RLRE   D LF+  GRG++P
Sbjct: 3   IRRLDLNLLLLLDELYREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGMRP 62

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           T + +++   V+  L  I+  +     F P  S R F I       L+ +PP+L+++ + 
Sbjct: 63  TPFTVSIAASVSGVLERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLGED 122

Query: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALP-ISHPSIVTTQVAEEALVVVYAKNH 182
           AP+   +L+     H    Q L +   DL +   P +    + T  + E     +  +NH
Sbjct: 123 APN--TDLRCVSLPHQQLEQALEQGSVDLAVGYFPDLQGEQVKTQALFEHNFTCIVRRNH 180

Query: 183 PRLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVT 242
           P +G TLS EQF A  H  +        +F   + ++   RRVH +    +++    + T
Sbjct: 181 PSIGDTLSLEQFLAADHLVVNQEGRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQLIAST 240

Query: 243 DLLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQIEAILC 302
           +++   P  L  +W     +++   P E+      + WH+  + D  + W R  +   LC
Sbjct: 241 NMVATVPLSLG-VWFASEQIKMLTPPIEVEKFELKLHWHRQMEDDPAVSWFRNAVFEELC 299