Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., LysR-family transcriptional regulator YbeF from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  158 bits (400), Expect = 1e-43
 Identities = 92/296 (31%), Positives = 168/296 (56%), Gaps = 8/296 (2%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           L+ +DLNLL +F+ + +  S+SKAA+ L +T +AVSQ+L RLR Q  DPLFIR G+G+ P
Sbjct: 7   LKKFDLNLLVIFECIYQHLSISKAAETLYITPSAVSQSLQRLRTQFNDPLFIRSGKGITP 66

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           T   +N+H H+   L+++    +T    + ++ K++FII       L++   +++ +  I
Sbjct: 67  TVTGINLHYHLENNLNSLE---QTINIMNQSSLKKKFIIYSP---QLLITQYVMKLVKYI 120

Query: 124 APHITVNLKSYE--DDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKN 181
                V ++ ++       P  +L+ R+AD+ ++  P+++ SIV T       ++V ++N
Sbjct: 121 RKDPQVEIEHHDILTTDELPEDLLAYRKADIVVSMAPLNNRSIVCTHFNRLECILVCSEN 180

Query: 182 HPRLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASV 241
           HPRLG T + ++   E  T L SR  G   + SL+D VL  R + ++S+S++ +  + S 
Sbjct: 181 HPRLGDTATIDEILQESFTQLVSRATGMKEYHSLMDDVLGERIIGFRSKSLMTIANSISS 240

Query: 242 TDLLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQI 297
           T+L+ F P+   D ++  + L+   +PF I  +  ++ +++A   + G   L E I
Sbjct: 241 TELIGFLPQTFFDYYSSSIKLKKVTIPFTIAPIQFYLMYNRASLNNSGFAELIEHI 296