Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., Probable transcriptional activator for leuABCD operon from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  151 bits (382), Expect = 2e-41
 Identities = 89/297 (29%), Positives = 160/297 (53%), Gaps = 4/297 (1%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           LR  DLNLLTVFD+VM+  ++++AA  LGM+  AVS  ++RL+    D LF+R GRG+QP
Sbjct: 19  LRMVDLNLLTVFDAVMQEQNITRAAHTLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQP 78

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           T  A  +   V + L  ++  L   +GF+P +S+R F +      D ++   +  ++  I
Sbjct: 79  TARAFQLFGSVRQALQLVQNEL-PGSGFEPTSSERVFNLCVCSPLDNILTSQIYNRVEKI 137

Query: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHP 183
           AP+I V  K+  + +      L  +E +  ++      P   +  + ++ +V+V ++ HP
Sbjct: 138 APNIHVVFKASLNQN--TEHQLRYQETEFVISYEEFRRPEFTSVPLFKDEMVLVASRKHP 195

Query: 184 RLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVTD 243
           R+   L     + E+H  ++  R+ ++      D       V YQ  ++++++   S T 
Sbjct: 196 RISGPLLEGDVYNEQHAVVSLDRYASF-SQPWYDTPDKQSSVAYQGMALISVLNVVSQTH 254

Query: 244 LLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQIEAI 300
           L+   P+ LA+ +AE L LQI PLP ++ S   ++ WH+A  +DKG  W+ + + ++
Sbjct: 255 LVAIAPRWLAEEFAESLDLQILPLPLKLNSRTCYLSWHEAAGRDKGHQWMEDLLVSV 311