Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., probable transcriptional activator for leuABCD operon (VIMSS) from Escherichia coli BW25113

 Score =  164 bits (414), Expect = 3e-45
 Identities = 98/297 (32%), Positives = 163/297 (54%), Gaps = 4/297 (1%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           LR  DLNLLTVFD+VM+  ++++AA  LGM+  AVS  ++RL+    D LF+R GRG+QP
Sbjct: 19  LRMVDLNLLTVFDAVMQEQNITRAAHVLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQP 78

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           T  A  +   V + L  ++  L   +GF+PA+S+R F +      D ++   +   I  I
Sbjct: 79  TARAFQLFGSVRQALQLVQNEL-PGSGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQI 137

Query: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHP 183
           AP+I V  KS  + +      L  +E +  ++      P   +  + ++ +V+V +KNHP
Sbjct: 138 APNIHVMFKSSLNQN--TEHQLRYQETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHP 195

Query: 184 RLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVTD 243
            +   L     + E+H A++  RF ++      D V     + YQ  +M+++++  S T 
Sbjct: 196 TIKGPLLKHDVYNEQHAAVSLDRFASF-SQPWYDTVDKQASIAYQGMAMMSVLSVVSQTH 254

Query: 244 LLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQIEAI 300
           L+   P+ LA+ +AE L LQ+ PLP +  S   ++ WH+A  +DKG  W+ EQ+ +I
Sbjct: 255 LVAIAPRWLAEEFAESLELQVLPLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSI 311