Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Uncharacterized HTH-type transcriptional regulator YbdO from Escherichia coli ECRC62

 Score =  129 bits (325), Expect = 6e-35
 Identities = 80/280 (28%), Positives = 145/280 (51%), Gaps = 4/280 (1%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           L+ +DLNLL +F+ + +  S+SKAA+ L +T +AVSQ+L RLR Q  DPLFIR G+G+ P
Sbjct: 7   LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           T   LN+H H+ + L  +    +T    + +  K+ FII G           L++ +   
Sbjct: 67  TTTGLNLHHHLEKNLKGLE---QTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD 123

Query: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHP 183
           A  + +             ++L  R+ADL +  +P+   S++   +      ++ +  HP
Sbjct: 124 A-SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNKHP 182

Query: 184 RLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVTD 243
           R+    ++EQ  AE+ T L S+  G       +D+    R++ ++  S+L ++ + +VTD
Sbjct: 183 RITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDEKFMNRKISFRGSSLLTIINSIAVTD 242

Query: 244 LLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKA 283
           LL   P  L + + + L L+   L   + S+  ++ ++K+
Sbjct: 243 LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKS 282