Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Uncharacterized HTH-type transcriptional regulator YbdO from Escherichia coli ECRC101

 Score =  129 bits (323), Expect = 1e-34
 Identities = 84/283 (29%), Positives = 148/283 (52%), Gaps = 10/283 (3%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           L+ +DLNLL +F+ + +  S+SKAA+ L +T +AVSQ+L RLR Q  DPLFIR G+G+ P
Sbjct: 7   LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDL---VVLPPLLQKI 120
           T   LN+H H+ + L  +    +T    + +  K+ FII G          +L   L++ 
Sbjct: 67  TTTGLNLHHHLEKNLRGLE---QTINIVNKSELKKNFIIHGPQLISCSNNSMLIRCLRQD 123

Query: 121 SDIAPHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAK 180
           S +       L S E+      ++L  R+ADL +  +P+   S++   +      ++ + 
Sbjct: 124 SSVEIECHDILMSAEN----AEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSN 179

Query: 181 NHPRLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATAS 240
            HPR+    ++EQ  AE+ T L S+  G       +D+    R++ ++  S+L ++ + +
Sbjct: 180 RHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIA 239

Query: 241 VTDLLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKA 283
           VTDLL   P  L +   + L L+   L   + S+  ++ ++K+
Sbjct: 240 VTDLLGIVPYELYNSHRDFLNLKEIKLEHPLPSIKLYISYNKS 282