Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., HTH-type transcriptional regulator LeuO from Alteromonas macleodii MIT1002

 Score =  156 bits (394), Expect = 6e-43
 Identities = 89/294 (30%), Positives = 154/294 (52%), Gaps = 6/294 (2%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           L   DLNL  VFD++   GS++KAAD L +T  AVS +L+RLRE + DPLF+R G  + P
Sbjct: 3   LNRIDLNLFAVFDAIYTAGSLTKAADVLCITQPAVSNSLARLREMLNDPLFVRTGHSMTP 62

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           T  A N+     + L+ +R  ++    FDP T+++ F    +   ++ ++P L+ ++ ++
Sbjct: 63  TPVAQNIIVPARQALALLRRSVQESHTFDPLTAEKSFNFASRDLLEVSIMPRLISRLQNL 122

Query: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHP 183
           AP+I   L +YE         ++    D +  A   + P +   ++A++ LVV+  KNHP
Sbjct: 123 APNI--GLTNYEIPRSQVVSAMASGTLDFYSDASTFTDPHLCKEKIAQDRLVVLARKNHP 180

Query: 184 RLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVTD 243
            L + L+ + F    H  ++ R+ G       +D++   R+   + +  L + +T   TD
Sbjct: 181 ALKNGLNLDTFLRLGHINVSQRKSGVGPIDIALDKMGKRRKEVMRGQHFLTVPSTIVKTD 240

Query: 244 LLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQI 297
           L+   P  L    A+   L +  +PF++  V  F+ WH +   D   +W+REQI
Sbjct: 241 LIACLPYHL----AKHYDLALYEVPFDLPPVEYFLYWHVSADHDHAHMWMREQI 290