Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  110 bits (274), Expect = 6e-29
 Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 5/298 (1%)

Query: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63
           L   DLNLL  FD++    +V++A  ++G T  A+S  LSRLR  + D LF+R   GLQP
Sbjct: 10  LHGIDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGPNGLQP 69

Query: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123
           T  A+ + + ++  L  I+  L+   GFDP  S   F I    +   V+LP LL  + + 
Sbjct: 70  TPRAVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLSLLEEK 129

Query: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHP 183
           AP I + ++ Y       S +L     DL +   P     I++ ++ +E  V +  K+HP
Sbjct: 130 APGIDIKVRDYSSRDDAVS-LLDSGGVDLTVGIPPTPTSRILSARLFQERFVCILRKDHP 188

Query: 184 RLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVTD 243
            LG     E F +  H  +     G  +  + +      RR       M    A  + +D
Sbjct: 189 ILGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPHMHVAPALVASSD 248

Query: 244 LLCFTPKRLA--DMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQIEA 299
           ++    + +     +AE+L +   PLP  +  VP  + WH+         WLR  + A
Sbjct: 249 MVATVIESVVAHSGFAERLAVFDFPLP--LNPVPFVLSWHRRNDGHPAQQWLRNGLLA 304