Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  139 bits (349), Expect = 1e-37
 Identities = 98/336 (29%), Positives = 166/336 (49%), Gaps = 14/336 (4%)

Query: 30  VERRNIAVALVLSLIVLALMILATCVGKLPISISDVTAILL------GEVT--SGFKRQV 81
           + RR   +   L  ++L   +L+   G   + +  V  I+L      GEV   +G +  V
Sbjct: 2   ITRRYALLLAALGAVLLVSCVLSLGFGPARVPVEVVWRIVLYKAFGVGEVNWPAGQEHIV 61

Query: 82  LLDIRLPRIFTALFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGS 141
            L IR+PR+      GA L L GA+ Q+++RNPL  P ++G TSGA  GA++ ++L  G 
Sbjct: 62  WL-IRVPRMLLGALVGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVI-VVLHVGE 119

Query: 142 GVAVV---FSAIAGGVMTAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLLLVKGS 198
            + ++    +A  G +++ + V  ++ ++G +   RL+L G+ V  V+ A   LLL  G 
Sbjct: 120 VIGLLTLPLAAFIGALLSMLVVLAVASRNGRLESDRLLLCGVAVSFVMMAAANLLLFMGD 179

Query: 199 LDSAITANLWLSGSLHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVV 258
             +A     W+ G L    W  +      VL+ L L+  +AR L  L  G++ A  LG+ 
Sbjct: 180 HRAASAVMFWMLGGLGLARWELLAVPTATVLLGLGLLLGMARPLNALMAGEQTAVTLGLN 239

Query: 259 VEPIRLFMILAAVTLAALATGAAGPIAFIALAAPQLAARLRQTANIPLVS-AGLMGACLL 317
              +RL + L A  +  +    +G I F+ L  P +A RL    +  L+    L+G+  L
Sbjct: 240 ARNVRLKVFLVASLMTGVLVSISGSIGFVGLMVPHIARRLVGAEHRRLLPVCVLLGSLFL 299

Query: 318 LGADLLTQWMPLALTLPIGRITGLVGGMYLLILLMR 353
           +  D+  + +     LPIG  T  +GG++ + L+ R
Sbjct: 300 VWVDVAARTLIAPEDLPIGVATAAIGGLFFIGLMRR 335