Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  132 bits (332), Expect = 1e-35
 Identities = 108/348 (31%), Positives = 162/348 (46%), Gaps = 24/348 (6%)

Query: 27  TLRVERRNIAVALVLSLIVLALMILATCVGKLPISISDVTAILLGEVTSGFKRQ------ 80
           T  V+ + + V L L L VLA+  L+  +G + + + D     L  +    + Q      
Sbjct: 2   TTLVKPKTLFVGLAL-LCVLAIW-LSLALGPVSLPLLDTLKAALRLMGLPIEAQGLEQAE 59

Query: 81  -VLLDIRLPRIFTALFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQII--- 136
            +L  IRLPR    L  G  L LSG   Q + RNPL  P ++G +SGAA GA + I+   
Sbjct: 60  LILGQIRLPRTLLGLAVGGVLALSGVAMQGLFRNPLADPGLVGVSSGAALGAAVAIVGGS 119

Query: 137 LFSGSGVA-----VVFSAIAGGVMTAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNG 191
            F G   A     + F A  GG+     VY L  ++G      ++L GI + ++ ++  G
Sbjct: 120 FFGGLPDAFGPYLLSFCAFLGGLGVTALVYRLGRRNGQTNVATMLLAGIALTALASSAVG 179

Query: 192 LLLVKGSLDSAITANLWLSGSLHAREWSHVFP---VMCGVLVLLPLIKSLARSLQMLEMG 248
           L        +  T   W  GSL+   +S ++P   V  GV + LP     A++L  L +G
Sbjct: 180 LFTYLADDATLRTLTFWNLGSLNGASYSRLWPLLLVSAGVAMWLP---RRAKALNALLLG 236

Query: 249 DEIARQLGVVVEPIRLFMILAAVTLAALATGAAGPIAFIALAAPQLAARLRQTANIPLVS 308
           +  A  LG+ VE ++  ++         A  AAG I F+ L  P L   L    +  L+ 
Sbjct: 237 ESEANHLGIDVEGLKRELVFCTALGVGAAVAAAGMIGFVGLVVPHLVRLLAGPDHRVLLP 296

Query: 309 AG-LMGACLLLGADLLTQWMPLALTLPIGRITGLVGGMYLLILLMRSK 355
           A  L GA LLL ADL+ +       LPIG +T  +G  + L LL+R +
Sbjct: 297 ASVLAGASLLLFADLVARLALAPAELPIGIVTAFIGAPFFLYLLLRGR 344