Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., iron-dicitrate transporter subunit FecD from Pseudomonas simiae WCS417

 Score =  150 bits (378), Expect = 6e-41
 Identities = 113/319 (35%), Positives = 167/319 (52%), Gaps = 9/319 (2%)

Query: 39  LVLSLIVLALMILATCVGKLPISISDVTAILLGEVTSGFKRQVLLDIRLPRIFTALFAGA 98
           L+L L++LA +I +   G + ++   V   LL      F    + + RLPR   A+ AG 
Sbjct: 10  LLLGLLLLATLI-SLSAGTVWLTPDAVLDRLLAHDALDFD---VWNHRLPRSLIAILAGC 65

Query: 99  ALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGSGVA-VVFSAIAGGVMTA 157
           A GL+GAI Q + RNPL SP+I+G T GA     + II +    +A +   A  GG   A
Sbjct: 66  AFGLAGAIVQGVIRNPLASPEILGVTQGAGLALTVAIISWPHMPIAWLPLVACLGGAGGA 125

Query: 158 IAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLLLVKGSLDSAITANLWLSGSLHARE 217
           + + L +      G  R  L+G+ +   L+++   L++   LD   TA L L+GSL +R 
Sbjct: 126 LLLALYNAGVSFSG-VRFALSGVAIAVTLSSVTEFLILSHPLDIN-TALLALTGSLWSRN 183

Query: 218 WSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRLFMILAAVTLAALA 277
           W HV  V+   LVL+P+   LA+ L ++ +GDE A  LG  +   R   +  AV L +L 
Sbjct: 184 WHHVALVL-PFLVLIPVGLCLAKPLNLIALGDEAAHSLGTALGRTRWLAMACAVVLTSLG 242

Query: 278 TGAAGPIAFIALAAPQLAARLRQTANIPLVSAGLM-GACLLLGADLLTQWMPLALTLPIG 336
            G  GPI FI L AP +A RL    +  L+ A ++ GA LL+ AD L + +     +P G
Sbjct: 243 VGVIGPIGFIGLVAPHMARRLVGGHHQYLLPAAMLTGALLLVLADTLGRTLIAPSEIPAG 302

Query: 337 RITGLVGGMYLLILLMRSK 355
            +T ++G  Y L LL R K
Sbjct: 303 VLTAVIGAPYFLWLLARFK 321