Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) from Variovorax sp. SCN45

 Score =  145 bits (367), Expect = 1e-39
 Identities = 107/287 (37%), Positives = 151/287 (52%), Gaps = 20/287 (6%)

Query: 80  QVLLDIRLPRIFTALFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFS 139
           Q++ DIRLPR   A  AGA LGL+G++ Q + RNPL  P ++G  SGA+ G  L +++F 
Sbjct: 54  QIVWDIRLPRTLGAWLAGALLGLAGSVAQGLFRNPLADPYLLGSASGASLGVALALLMFG 113

Query: 140 GSGVAVVF--------SAIAGGVMTAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNG 191
           GS  +  +        +A  G V+  +   LL+   G     RL+L G+ VG VL A   
Sbjct: 114 GSAASTQWVMRLGLTGAAFVGAVVAVMLTLLLA--RGVQQTLRLLLAGVIVGVVLGAAKD 171

Query: 192 LLLVKGSLDSAITANLWLSGSLHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEI 251
           L+ +  S D       ++ GS     WS    +     V L L  +LA  L  L +G+  
Sbjct: 172 LITI-ASADILQAIQGFILGSTGLVGWSACAVMAMVGAVCLLLGWALAPVLDGLALGEAT 230

Query: 252 ARQLGVVVEPIRLFMILAAVTLAALATGAA----GPIAFIALAAPQLAARLRQTANIPL- 306
           AR LG+ +  +R     A V + ALATGAA    G IAF+ LAAP L     +T +  L 
Sbjct: 231 ARSLGLPLGAMR----AALVVVLALATGAAVAQTGLIAFVGLAAPHLVRSAVKTTHARLI 286

Query: 307 VSAGLMGACLLLGADLLTQWMPLALTLPIGRITGLVGGMYLLILLMR 353
           V + LMG  LL+ ADLL +W+     LP+G +T ++GG YLL L+ R
Sbjct: 287 VLSALMGGLLLMSADLLARWLIAPQELPVGVLTAVLGGSYLLWLMHR 333