Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., Vitamin B12 ABC transporter, permease protein BtuC from Sphingobium sp. HT1-2

 Score =  118 bits (295), Expect = 2e-31
 Identities = 97/323 (30%), Positives = 159/323 (49%), Gaps = 9/323 (2%)

Query: 39  LVLSLIVLALM--ILATCVGKLPISISDVTAILLGEVTSGFKRQVLLDIRLPRIFTALFA 96
           L+  LI L L+  I +  +G + I+ + + ++L G       R +++D+RLPR+   L  
Sbjct: 1   LLPGLIALLLVAGIASVALGSVTIAPARILSVLAGGGDM-VARAIVIDLRLPRMAIGLLV 59

Query: 97  GAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQII--LFSGSGVAVVFSAIAGGV 154
           GA LGLSGA  Q   RNPL  P ++G ++ AA GA++ +   L     +A+   AI   +
Sbjct: 60  GAMLGLSGAALQGYLRNPLAEPAVLGVSNAAALGAVIALYFGLSELHPMALPLLAIVTAL 119

Query: 155 MTAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLLL-VKGSLDSAITANLWLSGSL 213
               A++LL+  S +     L+L GI V ++  A   L L +  +  +A+    WL GSL
Sbjct: 120 AAIGALFLLAGPSES--PLTLILAGIAVATLAGAGISLALNLSPNPFAAMEIMSWLMGSL 177

Query: 214 HAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRLFMILAAVTL 273
             R   H+   +  + V   L+    R+L  L +G++ AR LGV +   RL ++      
Sbjct: 178 ENRSIDHLLLALPCIAVGAALLLYDGRALDALTLGEDGARALGVDLSRARLRLMAGVAIG 237

Query: 274 AALATGAAGPIAFIALAAPQLAARLRQTANIPLVSAGLMGACLLLG-ADLLTQWMPLALT 332
              A    G I F+ L  P L   L   +   L+   ++G  +LL  AD+  + +P +  
Sbjct: 238 VGGAVAVTGSIGFVGLIVPHLVRPLTDRSPSALLLPSMLGGAVLLTLADIGVRIIPTSSE 297

Query: 333 LPIGRITGLVGGMYLLILLMRSK 355
           L +G +T ++G    LI LMR +
Sbjct: 298 LKLGVLTAILGVPVFLIHLMRER 320