Pairwise Alignments

Query, 350 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  166 bits (421), Expect = 6e-46
 Identities = 112/326 (34%), Positives = 171/326 (52%), Gaps = 7/326 (2%)

Query: 26  LMGLMLVALMGLTISSVFVGSR---DIPYAVTFDALFHFDEQNT---QHLLVHYLRVPRT 79
           L  L  V L+   +S  F  +R   ++ + +     F   E N    Q  +V  +RVPR 
Sbjct: 10  LAALGAVLLVSCVLSLGFGPARVPVEVVWRIVLYKAFGVGEVNWPAGQEHIVWLIRVPRM 69

Query: 80  GLAILVGAALGAAGVIMQAMTRNPLADPGILGVNAGAILMVVIGIAGFGLTDMLHYLWFG 139
            L  LVGA L   G ++QA+TRNPLADP +LGV +GA L  VI +   G    L  L   
Sbjct: 70  LLGALVGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHVGEVIGLLTLPLA 129

Query: 140 LF-GAAATSVGVYLLAGINQSPNPVRVVLAGAAMTVVLLSMTHLIMLNSAQEVFNQFRHW 198
            F GA  + + V  +A  N      R++L G A++ V+++  +L++        +    W
Sbjct: 130 AFIGALLSMLVVLAVASRNGRLESDRLLLCGVAVSFVMMAAANLLLFMGDHRAASAVMFW 189

Query: 199 SIGSLQGRGYEVLLPTSVFVLLGLIAAILLARGLDTVVLGHDAGKALGVNPLWIWIASAA 258
            +G L    +E+L   +  VLLGL   + +AR L+ ++ G      LG+N   + +    
Sbjct: 190 MLGGLGLARWELLAVPTATVLLGLGLLLGMARPLNALMAGEQTAVTLGLNARNVRLKVFL 249

Query: 259 VVTLLAGTATAAAGPISFLGLTAPHLARLWVGAEHRRLLPYSMLLGALLLLGADLAGRLI 318
           V +L+ G   + +G I F+GL  PH+AR  VGAEHRRLLP  +LLG+L L+  D+A R +
Sbjct: 250 VASLMTGVLVSISGSIGFVGLMVPHIARRLVGAEHRRLLPVCVLLGSLFLVWVDVAARTL 309

Query: 319 GSNDEISAGIMVALIGGPVFVLLVRR 344
            + +++  G+  A IGG  F+ L+RR
Sbjct: 310 IAPEDLPIGVATAAIGGLFFIGLMRR 335