Pairwise Alignments

Query, 350 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  159 bits (401), Expect = 1e-43
 Identities = 117/335 (34%), Positives = 167/335 (49%), Gaps = 21/335 (6%)

Query: 27  MGLMLVALMGLTISSVFVGSRDIPYAVTFDALFHF-----DEQNTQH--LLVHYLRVPRT 79
           +GL L+ ++ + +S + +G   +P   T  A         + Q  +   L++  +R+PRT
Sbjct: 12  VGLALLCVLAIWLS-LALGPVSLPLLDTLKAALRLMGLPIEAQGLEQAELILGQIRLPRT 70

Query: 80  GLAILVGAALGAAGVIMQAMTRNPLADPGILGVNAGAILMVVIGIAGF----GLTDML-- 133
            L + VG  L  +GV MQ + RNPLADPG++GV++GA L   + I G     GL D    
Sbjct: 71  LLGLAVGGVLALSGVAMQGLFRNPLADPGLVGVSSGAALGAAVAIVGGSFFGGLPDAFGP 130

Query: 134 HYLWFGLF-GAAATSVGVYLLAGINQSPNPVRVVLAGAAMTVVLLSMTHLIMLNSAQEVF 192
           + L F  F G    +  VY L   N   N   ++LAG A+T +  S   L    +     
Sbjct: 131 YLLSFCAFLGGLGVTALVYRLGRRNGQTNVATMLLAGIALTALASSAVGLFTYLADDATL 190

Query: 193 NQFRHWSIGSLQGRGYEVLLPTSVFVLLGLIAAILL---ARGLDTVVLGHDAGKALGVNP 249
                W++GSL G  Y  L P    +L+    A+ L   A+ L+ ++LG      LG++ 
Sbjct: 191 RTLTFWNLGSLNGASYSRLWP---LLLVSAGVAMWLPRRAKALNALLLGESEANHLGIDV 247

Query: 250 LWIWIASAAVVTLLAGTATAAAGPISFLGLTAPHLARLWVGAEHRRLLPYSMLLGALLLL 309
             +         L  G A AAAG I F+GL  PHL RL  G +HR LLP S+L GA LLL
Sbjct: 248 EGLKRELVFCTALGVGAAVAAAGMIGFVGLVVPHLVRLLAGPDHRVLLPASVLAGASLLL 307

Query: 310 GADLAGRLIGSNDEISAGIMVALIGGPVFVLLVRR 344
            ADL  RL  +  E+  GI+ A IG P F+ L+ R
Sbjct: 308 FADLVARLALAPAELPIGIVTAFIGAPFFLYLLLR 342