Pairwise Alignments

Query, 350 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., Vitamin B12 ABC transporter, permease protein BtuC from Sphingobium sp. HT1-2

 Score =  146 bits (369), Expect = 6e-40
 Identities = 113/324 (34%), Positives = 170/324 (52%), Gaps = 15/324 (4%)

Query: 26  LMGLMLVALMGLTISSVFVGSRDIPYAVTFDALFHFDEQNTQHLLVHYLRVPRTGLAILV 85
           L+ L+LVA     I+SV +GS  I  A     L    +   + +++  LR+PR  + +LV
Sbjct: 5   LIALLLVA----GIASVALGSVTIAPARILSVLAGGGDMVARAIVID-LRLPRMAIGLLV 59

Query: 86  GAALGAAGVIMQAMTRNPLADPGILGVNAGAILMVVIGIAGFGLTDMLHYLWFGLFG--- 142
           GA LG +G  +Q   RNPLA+P +LGV+  A L  VI +  FGL++ LH +   L     
Sbjct: 60  GAMLGLSGAALQGYLRNPLAEPAVLGVSNAAALGAVIALY-FGLSE-LHPMALPLLAIVT 117

Query: 143 AAATSVGVYLLAGINQSPNPVRVVLAGAAMTVVLLSMTHLIMLNSAQEVFN--QFRHWSI 200
           A A    ++LLAG ++SP  + ++LAG A+   L      + LN +   F   +   W +
Sbjct: 118 ALAAIGALFLLAGPSESP--LTLILAGIAVAT-LAGAGISLALNLSPNPFAAMEIMSWLM 174

Query: 201 GSLQGRGYEVLLPTSVFVLLGLIAAILLARGLDTVVLGHDAGKALGVNPLWIWIASAAVV 260
           GSL+ R  + LL     + +G    +   R LD + LG D  +ALGV+     +   A V
Sbjct: 175 GSLENRSIDHLLLALPCIAVGAALLLYDGRALDALTLGEDGARALGVDLSRARLRLMAGV 234

Query: 261 TLLAGTATAAAGPISFLGLTAPHLARLWVGAEHRRLLPYSMLLGALLLLGADLAGRLIGS 320
            +  G A A  G I F+GL  PHL R         LL  SML GA+LL  AD+  R+I +
Sbjct: 235 AIGVGGAVAVTGSIGFVGLIVPHLVRPLTDRSPSALLLPSMLGGAVLLTLADIGVRIIPT 294

Query: 321 NDEISAGIMVALIGGPVFVLLVRR 344
           + E+  G++ A++G PVF++ + R
Sbjct: 295 SSELKLGVLTAILGVPVFLIHLMR 318