Pairwise Alignments

Query, 350 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., Ferric enterobactin transport system permease protein FepD (TC 3.A.1.14.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  203 bits (516), Expect = 6e-57
 Identities = 130/324 (40%), Positives = 183/324 (56%), Gaps = 5/324 (1%)

Query: 22  RDYWLMGLMLVALMGLTISSVFVGSRDIPYAVTFDALFHFDEQNTQHLLVHYLRVPRTGL 81
           R + + GL+L+  +   +S V +G++ +P AV  +A F    Q+    +V   R+PRT  
Sbjct: 9   RAFAVPGLLLLLSLAAVLSLV-IGAKPLPAAVVLEA-FTGVCQSADCTIVLDARLPRTLA 66

Query: 82  AILVGAALGAAGVIMQAMTRNPLADPGILGVNAGAILMVVIGIAGFGLTDMLHYLWFGLF 141
            +L G ALG AG +MQ +TRNPLADPGILGVN GA   +V+G A FG +  L  L+    
Sbjct: 67  GLLAGGALGLAGALMQTLTRNPLADPGILGVNNGASFAIVLGAALFGFSTPLEQLFMAFS 126

Query: 142 GAAATSVGVYLLAGINQSP-NPVRVVLAGAAMTVVLLSMTHLIMLNSAQEVFNQFRHWSI 200
           GA   S+ V           +PVR+ LAG A+  VL  +T  I L +  EV++Q R W  
Sbjct: 127 GALIASLIVAFTGSQGGGQLSPVRLTLAGVALGAVLEGLTSGIALLNP-EVYDQLRFWQA 185

Query: 201 GSLQGRGYEVLLPTSVFVLLGLIAAILLARGLDTVVLGHDAGKALGVNPLWIWIASAAVV 260
           GSL  R  + L      V++  I A+ L+R L+++ LG D   ALG       +     +
Sbjct: 186 GSLDIRSLQTLKVALAPVVIAGIVALFLSRALNSLSLGSDTATALGSKVARTQLIGLLAI 245

Query: 261 TLLAGTATAAAGPISFLGLTAPHLARLWVGAEHRRLLPYSMLLGALLLLGADLAGRLIGS 320
           T+L G+ATA  GPI+F+GL  PH+AR  VGA+HR  LP ++L    LLL AD+ GRL+  
Sbjct: 246 TVLCGSATALVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRLLVP 305

Query: 321 NDEISAGIMVALIGGPVFVLLVRR 344
             E+   ++ A IG PV + LVRR
Sbjct: 306 G-ELRVSVVSAFIGAPVLIFLVRR 328