Pairwise Alignments

Query, 350 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., ABC-type Fe3+-siderophore transport system, permease component from Enterobacter asburiae PDN3

 Score =  142 bits (359), Expect = 1e-38
 Identities = 104/329 (31%), Positives = 162/329 (49%), Gaps = 17/329 (5%)

Query: 28  GLMLVALMGLTIS-SVFVGSRDIPYAVTFDA------LFHFDEQNTQHLLVHYLRVPRTG 80
           GL+ + L+ LTI+ SV VG   IP    F A      L           ++   R+ R  
Sbjct: 18  GLLALVLLFLTIALSVSVGELSIPLDNVFYAISNKMGLTEVPLTRIYESVIWDFRLSRAL 77

Query: 81  LAILVGAALGAAGVIMQAMTRNPLADPGILGVNAGA----ILMVVIGIAGFGLTDMLHYL 136
           +A   GA L   G ++Q++ +N LA+P +LGV+AGA    + +VV+GI G G   +    
Sbjct: 78  VAACCGAGLAICGAVLQSLLKNALAEPYVLGVSAGASTGAVSVVVLGI-GTGAVSLSAGA 136

Query: 137 WFGLFGAAATSVGVYLLAGINQSPNPVRVVLAGAAMTVVLLSMT-HLIMLNSAQEVFNQF 195
           + G F A A    V  L    +  N  R +LAG A + +  ++T + I  +++ +     
Sbjct: 137 FAGAFAAFAF---VAFLTNGARGGNE-RTILAGVAASQLFNAITAYTISTSASAQQARDV 192

Query: 196 RHWSIGSLQGRGYEVLLPTSVFVLLGLIAAILLARGLDTVVLGHDAGKALGVNPLWIWIA 255
             W +GS  G  +       V VL GL   +  +R LD    G DA  +LG+   W+ +A
Sbjct: 193 MFWLLGSFSGVRWPEFQLALVVVLAGLAVCLYYSRALDAFTFGDDAAASLGIAVPWVRLA 252

Query: 256 SAAVVTLLAGTATAAAGPISFLGLTAPHLARLWVGAEHRRLLPYSMLLGALLLLGADLAG 315
                 L+  T  + AG I F+GL  PH+ R   G  HR LL  S L GA+L++ AD+A 
Sbjct: 253 LFTTTALITATIVSMAGSIGFVGLVVPHVMRFLFGPLHRTLLIASALAGAILMVLADIAS 312

Query: 316 RLIGSNDEISAGIMVALIGGPVFVLLVRR 344
           R++ +   +  G++ AL+G P F +++ R
Sbjct: 313 RMLIAPQSLPVGVVTALVGVPFFAVIIYR 341