Pairwise Alignments

Query, 350 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., ferric citrate ABC transporter permease from Escherichia coli BL21

 Score =  162 bits (409), Expect = 2e-44
 Identities = 109/326 (33%), Positives = 169/326 (51%), Gaps = 12/326 (3%)

Query: 26  LMGLMLVALMGLTISSVFVGSR-DIPYAVTFDALFHFDEQNTQHLLVHYLRVPRTGLAIL 84
           L GL + AL+ +   S+F  S   +  A    AL           LV  LR+PR+ +A+L
Sbjct: 10  LWGLPVAALIIIFWLSLFCYSAIPVSGADATRALLPGHTPTLPEALVQNLRLPRSLVAVL 69

Query: 85  VGAALGAAGVIMQAMTRNPLADPGILGVNAGAILMVVIGIAGFGLTDMLHYLWFGLFGAA 144
           +GA+L  AG ++Q +T NP+A P +LG+N+GA L + +  A    T +  Y    L   A
Sbjct: 70  IGASLALAGTLLQTLTHNPMASPSLLGINSGAALAMALTSA-LSPTPIAGY---SLSFIA 125

Query: 145 ATSVGVYLL------AGINQSPNPVRVVLAGAAMTVVLLSMTHLIMLNSAQEVFNQFRHW 198
           A   GV  L       G   + +  +++LAG A++   + +T + +L +    +  F +W
Sbjct: 126 ACGGGVSWLLVMTAGGGFRHTHDRNKLILAGIALSAFCMGLTRITLLLAEDHAYGIF-YW 184

Query: 199 SIGSLQGRGYEVLLPTSVFVLLGLIAAILLARGLDTVVLGHDAGKALGVNPLWIWIASAA 258
             G +    ++ +      V+  +   +LLA  L+ + L       LGVN   + +    
Sbjct: 185 LAGGVSHARWQDVWQLLPVVVTAVPVVLLLANQLNLLNLSDSTAHTLGVNLTRLRLVINM 244

Query: 259 VVTLLAGTATAAAGPISFLGLTAPHLARLWVGAEHRRLLPYSMLLGALLLLGADLAGRLI 318
           +V LL G   + AGP++F+GL  PHLAR W G + R +LP SMLLGA L+L AD+  R +
Sbjct: 245 LVLLLVGACVSVAGPVAFIGLLVPHLARFWAGFDQRNVLPVSMLLGATLMLLADVLARAL 304

Query: 319 GSNDEISAGIMVALIGGPVFVLLVRR 344
               ++ AG ++ALIG P FV LVRR
Sbjct: 305 AFPGDLPAGAVLALIGSPCFVWLVRR 330