Pairwise Alignments

Query, 438 a.a., vibriobactin biosynthesis amide synthase VibH from Vibrio cholerae E7946 ATCC 55056

Subject, 4293 a.a., peptide synthase from Pseudomonas simiae WCS417

 Score = 65.9 bits (159), Expect = 2e-14
 Identities = 82/346 (23%), Positives = 132/346 (38%), Gaps = 18/346 (5%)

Query: 5    LAQKPFWQRHLAYPHINLDTVAHSLRLTGPLDTTLLLRALHLTVSEIDLFRARFSAQGEL 64
            LAQ   W      PH +  T+  +LRL G LD   +  +    +   +  R RF  +   
Sbjct: 671  LAQSRLWITWQLDPHSSAYTIPGALRLRGELDEDAVRTSFQQLIQRHEALRTRFYERDGQ 730

Query: 65   YWHPFSPPIDYQDLSIHLEAEPLAWR-----QIEQDLQRSS-TLIDAPITSHQVYRLSHS 118
             +       D+    I L   P+A R     QI +D  R+   L   P+    + RL   
Sbjct: 731  AFQRVDTKADFDLQVIDLSDLPVAEREARAQQIREDEARTQFDLEKGPLLWVTLVRLDDE 790

Query: 119  EHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQT---PTAAFKPYQSYLEEEAAYLT 175
            +H +    HHI+ DG+ + +     S+ Y + + GQT   P  A + Y  Y   +  +L 
Sbjct: 791  DHQLLVTLHHIIADGWSLNILMDEFSRLYAAAVQGQTLELPPLALQ-YADYGTWQRQWLA 849

Query: 176  SHRYWQDKQFWQGYLREAPDLTLTSATYDPQLSH----AVSLSYTLNSQLNHLLLKLANA 231
                 +   +W+  L E    TL+ AT  P+  H    A   +  L + L+  + + A  
Sbjct: 850  EGEGQRQLAYWKAQLGEEHP-TLSLATDHPRSVHHRHSASRHTVRLGASLSEAIRQTART 908

Query: 232  NQIGWPDALVAL--CALYLESAEPDAPWLWLPFMNRWGSVAANVPGLMVNSLPLLRLSAQ 289
            ++      L+A     LY  S + D   + +P  NR       + G  +N+L L      
Sbjct: 909  HESTPFMLLLAAFQSVLYRYSGQRDIR-IGVPNANRPRQETQGLVGFFINTLVLRAELDG 967

Query: 290  QTSLGNYLKQSGQAIRSLYLHGRYRIEQIEQDQGLNAEQSYFMSPF 335
            +      L  + QA      H     EQ+ +      EQ  F   F
Sbjct: 968  RLPFTELLAATRQAALGAQAHQDLPFEQLLEAFPQAREQGLFQVMF 1013



 Score = 53.5 bits (127), Expect = 1e-10
 Identities = 50/197 (25%), Positives = 78/197 (39%), Gaps = 12/197 (6%)

Query: 11   WQRHLAYPHINLDTVAHSLRLTGPLDTTLLLRALHLTVSEIDLFRARFSAQGELYWHPFS 70
            WQ     P  N+  +A   RL G LD      AL   +   +  R  F +   + +   S
Sbjct: 1718 WQMEPDSPAYNVGGMA---RLRGVLDVGRFEAALQALIMRHETLRTTFPSVDGVAYQNVS 1774

Query: 71   PP----IDYQDLSIHLEAE--PLAWRQIEQDLQRSSTLIDAPITSHQVYRLSHSEHLIYT 124
            P     +D+QD S   EA+  P   R  + +      L   P+    + +    EH +  
Sbjct: 1775 PQTGLRMDWQDFSALSEADRQPRLQRLADHEAHTPFNLETGPLLRACLVKAGEQEHYLVL 1834

Query: 125  RAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKP--YQSYLEEEAAYLTSHRYWQD 182
              HHIV +G+ M +F + LS  Y++ +  +    A  P  Y  Y   +  +L S    + 
Sbjct: 1835 TLHHIVTEGWAMDIFARELSALYEAFIDERDSPLAPLPVQYLDYSVWQRQWLESGERQRQ 1894

Query: 183  KQFWQGYL-REAPDLTL 198
              +W   L  E P L L
Sbjct: 1895 LDYWTAQLGNEHPLLEL 1911



 Score = 41.2 bits (95), Expect = 7e-07
 Identities = 53/219 (24%), Positives = 88/219 (40%), Gaps = 16/219 (7%)

Query: 19   HINLDTVAHSLRLTGPLDTTLLLRALHLTVSEIDLFRARFSAQGELYWHPFSPPIDYQDL 78
            H N   V   L+L   LD   L +AL   +   D  R  FS + +  WH     +    +
Sbjct: 2781 HWNQALVLKPLQL---LDPQRLEQALLAVLEHHDALRLSFSKR-DAQWHAEHRAVPQGGV 2836

Query: 79   SIHLEAEPLAW-RQIEQDLQRSSTLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMM 137
             +  +   +A    +  D QRS  L   P+    +      +  +    HH+V+DG    
Sbjct: 2837 LMQAQVRDMAHCTALFTDTQRSLDLEHGPLLRALLVDGPEGQQRLLIAIHHLVVDGVSWR 2896

Query: 138  LFEQRLSQHYQSLLSGQT-----PTAAFKPYQSYLEEEAAYLTSHRYWQDKQFWQGYLRE 192
            +  + L   Y+ L  GQ+      T+A + + + L+   AY  S    ++   WQ  L  
Sbjct: 2897 VLLEDLQTVYRQLNDGQSVSLPAKTSALRDWAARLQ---AYAGSESLREELSVWQHQL-A 2952

Query: 193  APDLTLTSATYDPQLSH--AVSLSYTLNSQLNHLLLKLA 229
             PD  L  A     L +  A ++S  L+++    LL+ A
Sbjct: 2953 GPDAALPVARPQGSLRNRDADTVSVRLDAEHTRQLLQQA 2991