Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 552 a.a., Medium-chain fatty-acid--CoA ligase from Xanthobacter sp. DMC5

 Score =  214 bits (546), Expect = 5e-60
 Identities = 158/526 (30%), Positives = 237/526 (45%), Gaps = 18/526 (3%)

Query: 20  GYWQDKTLLDYLQQSAERTPNALALV------GDNQQWRYQAMLERIEQLAAGFTELGLG 73
           G+WQ KTLLDY +      P+A+A++      G  ++  Y  +     + AAG   LGLG
Sbjct: 19  GFWQGKTLLDYFEICLAEKPDAVAVLTVLTGTGARRELTYAELDRLAWRAAAGLRRLGLG 78

Query: 74  CGDNVVLQLGNVAEFYLCFFALLRQGIRPILALPAHRLAEIRYFCQHSQAKAYLIDGAQR 133
             D +  QL N  EF + + A LR GI     +P  R  E+ +  +H + K + +    R
Sbjct: 79  KDDVLSCQLPNGWEFVVLYIACLRLGIVFNPVMPIFREHELSFMLRHGETKVFAVPRVFR 138

Query: 134 PFDYQALAQELLACCPTLQTVIVRG-------QTRVTDPKFIELASCYSASSCQANADPN 186
            FD++A+A  L A  P L+ ++V G       +  + DP            S +  +D N
Sbjct: 139 GFDHEAMAHRLKADLPDLRHLVVAGGAGPDAFEASLLDPALDAEVPAIREISARDRSDAN 198

Query: 187 QIAFFQLSGGTTGTPKLIPRTHNDYAYSVTASVEICRFDQHTRYLCVLPAAHNFPLSSPG 246
            +     + GTTG PK +  T N    ++ A             L   P AH       G
Sbjct: 199 AVCQLIYTSGTTGEPKGVMHTANTMYSNLIAYAGRLGLGDADVVLMASPMAHQTGFMY-G 257

Query: 247 ALGVFWAGGCVVLSQDASPQHAFKLIEQHKITVTALVPPLALLWMDHAEKSTYDLSSLHF 306
            L  F     +VL        A +LI Q  +T T    P  +   +  E+   D SSL  
Sbjct: 258 LLMPFMLKARMVLMDSWDKALAARLIAQEGVTFTMASTPFLMDITNTVEELGTDSSSLRI 317

Query: 307 VQVGGAKFSEAAARRLPKALGCQLQQVFGMAE-GLVNYTRLDDSAELIATTQGRPISAHD 365
               G         R  K LG ++   +GM E G V      D  E    T G  +   +
Sbjct: 318 FLCAGTAIPGVLVERARKVLGTKIISAWGMTENGAVTVVSPSDPDERSINTDGFVLPGME 377

Query: 366 QLLVVDEQGQPVASGEEGYLLTQGPYTIRGYYRADQHNQRAFNAQGFYITGDKVKLSSEG 425
            L +    G  +  G+EG L  +G     GY +  Q N  A +A+G++ TGD  ++  +G
Sbjct: 378 -LQIRGADGAALPVGQEGALFVRGCSNFGGYLKRPQWN--ATDAEGWFDTGDIARIDEKG 434

Query: 426 YVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAALIAISDEYLGERSCAVIVLKPE 485
           Y+ + GR KD I RG E +   E+E+ L  HP++   A++A  DE LGER+CA +V K  
Sbjct: 435 YIRICGRTKDVIIRGAENLPVVEIESVLYKHPSIQQVAIVAYPDERLGERACAFVVPKAG 494

Query: 486 QSVNTIQLKRFLHQAGLADYKIPDQIQFIDQLPKTSVGKIDKNALR 531
           +S +  ++  FL    LA    P++++  +QLP T+ GKI K ALR
Sbjct: 495 KSFSFEEMIAFLESQHLAKQYFPERMEVREQLPSTASGKIQKFALR 540