Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

 Score =  148 bits (374), Expect = 5e-40
 Identities = 143/548 (26%), Positives = 244/548 (44%), Gaps = 52/548 (9%)

Query: 20  GYWQDKTLLDYLQQSAERTPNALALV-GDNQQWRYQAMLERIEQLAAGFTELGLGCGDNV 78
           G +Q   L+  L  S  R      +V  D  ++ Y  ++ER+ +LA   TE G+  GD V
Sbjct: 12  GAYQYPLLIKRLLMSGARYEKTREIVYRDKLRYTYPTLIERVARLANVLTEAGVKAGDTV 71

Query: 79  VLQLGNVAEFYLCFFALLRQGIRPILALPAHRL------AEIRYFCQHSQAKAYLIDGAQ 132
            +   +   +  C FA+      P++    H +       +I Y   H++ +  L++   
Sbjct: 72  AVMDWDSHRYLECMFAI------PMIGAVIHTINVRLSPEQILYTMNHAEDRFVLVNSEF 125

Query: 133 RPFDYQALAQELLACCPTLQTVIVRGQTRVTD-PKFI-ELASCYSASSCQ---ANADPNQ 187
               YQA+A  L     TL  ++  G ++  + P  + E  S  +A+S +    + D N 
Sbjct: 126 VGL-YQAIAGHLTTVDKTL--LLTDGDSKTAELPNLVGEYESLLAAASPKYDFQDFDENS 182

Query: 188 IAFFQLSGGTTGTPKLIPRTHNDYAY------SVTASVEICRF-DQHTRYLCVLPAAHNF 240
           +A    + GTTG PK +  TH           ++  SV+  R    +  Y+ + P  H  
Sbjct: 183 VATTFYTTGTTGNPKGVYFTHRQLVLHTIGVATIMGSVDSVRLLGTNDVYMPITPMFHVH 242

Query: 241 PLSSPGALGVFWAGGCVVLSQDASPQHAFKLIEQHKITVTALVPPLALLWMDHAEKSTYD 300
               P    +   G   V      P++  +L  + K+T +  VP +  + ++       D
Sbjct: 243 AWGLPYVATML--GLKQVYPGRYDPEYLVELWRKEKVTFSHCVPTILQMVLNAKAAQGVD 300

Query: 301 LSSLHFVQVGGAKFSEAAARRLPKALGCQLQQVFGMAEG--LVNYTRLDDSAELIATTQG 358
                 V +GG+  +        KA G QL   +GM+E   LV+   L++  EL+A T+ 
Sbjct: 301 FGGWKIV-IGGSALNRTLYEAA-KARGIQLTAAYGMSETGPLVSCAHLNE--ELMAGTED 356

Query: 359 RPISAHD---------QLLVVDEQGQ--PVASGEEGYLLTQGPYTIRGYYRADQHNQRAF 407
             I+            +  ++D +G   P     +G L+ + P+   GYY   Q     +
Sbjct: 357 ERITYRIKAGVPGPLVEAAIMDAEGNFLPADGESQGELVLRAPWLTEGYYNEPQKGAELW 416

Query: 408 NAQGFYITGDKVKLSSEGYVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAALIAI 467
            A G+  TGD   L + G + +  R KD I  GGE I++  +E+ +  HPAV + A++ I
Sbjct: 417 -AGGWMHTGDVATLDAFGVIDIRDRIKDVIKTGGEWISSLALEDLVSRHPAVREVAVVGI 475

Query: 468 SDEYLGERSCAVIVLKPEQSVNTIQLKR----FLHQAGLADYKIPDQIQFIDQLPKTSVG 523
           +D   GER  A++V++    +   +LK     F+    L+ + IP QI  + ++PKTSVG
Sbjct: 476 ADPQWGERPFALLVVRDGHVIGARELKEHLKPFVELGHLSKWAIPSQIAVVTEIPKTSVG 535

Query: 524 KIDKNALR 531
           K+DK  +R
Sbjct: 536 KLDKKRIR 543